Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02-
24] 1,683 sequences; 26,819,972 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq1295 118 3e-21
>seq1295
Length=44835
Score = 118 bits (130), Expect = 3e-21
Identities = 447/697 (64%), Gaps = 11/697 (2%)
Strand=Plus/Minus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
|||||||| ||||| ||||||||||| | ||| | || | | || || || |||
Sbjct 17995 TATTTTGGCTTCAAGACTCTTGAACGCTCATATCTCCTGAGAAT---TGACGGGAAAATT 17939
Query 110364 GAAC---GTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATT 110420
| | | || ||||||||| | | ||||||||| | ||||| || || | || ||
Sbjct 17938 GCAGAGAGACCGCAACACATGATCATGCGTGTTGCGGTGGGTATACACGGCGAAGACATC 17879
Query 110421 AAAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCT 110480
| |||| || || || | | | || ||| | | ||||||| | ||
Sbjct 17878 GAGGCTGCAATCGAGACCTACAACCTCATGTCGAACAAGTACTTCACTCATGCTTCACCA 17819
Query 110481 ACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGA-AT 110539
||||| || | || || || | ||||||||||| || |||||| || ||
Sbjct 17818 ACCCTGTTCATGGCCGGCACACCATCCGCCCAATTGGCTTCATG-TTTCTTGATTGACAT 17760
Query 110540 TAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAA 110599
|| || || ||| || || |||||||| |||| ||| | || | || || ||
Sbjct 17759 GAAGGAGGACAGTATCGAGGGCATTTATGACACTCTGAAAACATGCGCCATGATCTCAAA 17700
Query 110600 AAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGC 110659
|| |||| || || ||| | | || || |||||| ||| ||| | |||| |
Sbjct 17699 GAATGCTGGTGGTATAGGTCTCAATGTACACCGCATTCGCGCAACAGGGTCGTATATTGG 17640
Query 110660 AACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGC 110719
| || || |||||| ||| | || || ||| | | || | |||| |||||||
Sbjct 17639 TGGCACAAATGGAACTTCAAACGGATTGGTACCTATGCTTCGTGTATACAACAACACTGC 17580
Query 110720 AAAATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCATTTGCTATCTATCTCGAACC 110776
||||| |||||||||| || | | || | ||||| |||||||| || ||
Sbjct 17579 GCGGTATGTCGATCAAGGTGGCAACAAGCGTCCCGGTGCCTTTGCCATCTATCTTGAGCC 17520
Query 110777 TTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACA 110836
|||||| | || ||||| ||| | || || || || || || || ||||||
Sbjct 17519 GTGGCATGCGGACATATTCTCCTTCCTCGACCTGCGCAAGAACCATGGCAAAGAAGAAGT 17460
Query 110837 AAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCA 110896
| || || || | || || || | ||||| |||| || ||||||||||| || |
Sbjct 17459 CCGTGCTCGCGACCTTTTCTACGCGCTTTGGATCCCAGACTTGTTCATGAAACGGGTGGA 17400
Query 110897 AGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATA 110956
| || ||| ||| || | |||||||| || | ||||| || ||||||| ||
Sbjct 17399 GCAGAACAGCACATGGACTTTGATGTGTCCGCACGAATGCCCTGGCCTTGCTGATGTGTA 17340
Query 110957 TGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAA 110993
||| || |||| || | || |||||| |||| |||
Sbjct 17339 TGGGGAAAAGTTCGAGGCTCTCTACGAACAATACGAA 17303
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186787208236363
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |