Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02-
24] 1,683 sequences; 26,819,972 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq990 120 2e-22
seq1047 98.7 7e-16
>seq990
Length=11377
Score = 120 bits (132), Expect = 2e-22
Identities = 151/205 (74%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606
|| || || || |||||||| |||||||| || ||||| ||||| | || || | |||
Sbjct 10532 TGGAGGGTACTTTCTTTTTGAATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCAAGCTGT 10473
Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666
|| || || |||||||| |||||||| || | || | ||| ||||| || ||||||
Sbjct 10472 TTGCCAGCGAAAATCAAGCGCTGCTGGTCCGGAGGGATACCCTCTTTATCTTGGATTTTC 10413
Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725
||||| | | ||| | ||||||| || || || |||| ||||| ||||| || ||
Sbjct 10412 GATTTCA-CGTTGTCGATGGTGTCGGACGACTCAACCTCAAGTGTGATGGTTTTGCCGGT 10354
Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750
| || || |||||||||||||||
Sbjct 10353 CAGTGTCTTGACAAAGATCTGCATA 10329
Score = 102 bits (112), Expect = 5e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| || | || ||| | ||||||||| || ||||| || || || || ||||| || ||
Sbjct 11013 ACCGCCACGCAGACGCAGCACCAAATGCAGGGTGCTTTCCTTCTGAATATTGTAGTCTGA 10954
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | |||| |||||||| || || || || || || | |||||| ||| | ||
Sbjct 10953 CAACGTCCTACCGTCTTCCAATTGCTTGCCCGCGAAGATTAATCTCTGCTGGTCTGGAGG 10894
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700
| || || ||||| ||| ||| |||| | | |||| || ||||| ||||| |
Sbjct 10893 TATGCCCTCCTTGTCTTGAATCTTCGACTTCA-CGTTGTCAATCGTATCGCTCGATTCGA 10835
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || || || || | ||||| || ||||||||||||
Sbjct 10834 CTTCTAGGGTGATGGTCTTGCCGGTGAGAGTTTTGACGAAGATCTGCATA 10785
>seq1047
Length=44052
Score = 98.7 bits (108), Expect = 7e-16
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | ||| || | |||| ||| ||||||||||| || || || || |||||||||
Sbjct 5376 CCACCACGCAAGCGGAGAACCAGATGAAGAGTGCTCTCCTTCTGAATATTATAATCGGAG 5435
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || || | || || |||||||| |||| ||||||||| || | ||
Sbjct 5436 AGGGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGTGGG 5495
Query 33643 ACACCTTCTTTGTC 33656
| ||| ||||||||
Sbjct 5496 ATACCCTCTTTGTC 5509
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328697257767360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |