Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02-
24] 1,683 sequences; 26,819,972 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq959 156 6e-32
seq243 105 1e-16
seq1295 86.0 9e-11
>seq959
Length=28360
Score = 156 bits (172), Expect = 6e-32
Identities = 344/506 (68%), Gaps = 10/506 (2%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||||||| |||||||| || ||||| || |||||||| ||||| ||||||||| |||| |
Sbjct 15620 GATATGGCAAATGTAC-AAGAAGGCGGAAGCCTCCTTCTGGACGGCCGAGGAGATCGATC 15678
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCATCA 1455891
| || | ||||| || ||| || |||||||| ||||||
Sbjct 15679 TTTCAAAAGATTTGCATGACTGGAACAAGCGCCTGAATGATGACGAGCGTTTCTTCATCT 15738
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
|| ||||||||||||||| || || || || || || ||||||||| | ||
Sbjct 15739 CTCATGTCCTCGCCTTTTTT-GCGGCATCAGACGGGATTGTCAACGAGAACCTCGTCGAG 15797
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
|| || ||||| ||| | || || ||||| | || ||||| |||||||||
Sbjct 15798 CGATTCTCAGCCGAGGTGCAAATACCCGAAGCACGCTGCTTCTACGGCTTCCAGATCATG 15857
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071
|| || || ||||||||||| || ||||| || || |||||||||||| ||| || |||
Sbjct 15858 ATGGAGAATATCCACTCTGAGACTTACTCTCTGCTCATCGACACCTACATCAGCGAACCG 15917
Query 1456072 GTCGAGAAGGAC-CACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGC 1456130
| | | || | || || ||||||||||| | || | | | || |||||
Sbjct 15918 AAACA-ACGCACGTATCTATTCAACGCCATCGACAACATCCCATGCATCGGTAAGAAGGC 15976
Query 1456131 CGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTC 1456190
|| |||||| || ||||| | | | | | ||||| || | | || |||||
Sbjct 15977 GGATTGGGCGCTGCGATGGATTAGCGA-TAAGAATTCGAC-GTTCGGCTGTCGTCTCGTT 16034
Query 1456191 GGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTC 1456249
| || ||||| || |||||||| || ||||| || ||| |||| || ||||||
Sbjct 16035 GCTTTCGCCGCTGTAGAGGGCATTTTCTTCTCTAGCTCCTTCGCATCCATTTTCTGGCTC 16094
Query 1456250 AAGAAGCGCGGCCTCATGCCCGGTCT 1456275
|| ||||| || ||||||||||||||
Sbjct 16095 AAAAAGCGTGGTCTCATGCCCGGTCT 16120
>seq243
Length=163308
Score = 105 bits (116), Expect = 1e-16
Identities = 158/223 (71%), Gaps = 6/223 (3%)
Strand=Plus/Minus
Query 724920 GTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGTCGATC 724979
|| |||||||||||||| || || | | ||| |||||| |||||||||||
Sbjct 58385 GTTCTCAAGCAGGTGCATCCTGACACGGGT-----ATC-TCCAACCGCGCCATGTCGATC 58332
Query 724980 ATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCG 725039
||||||| ||||| |||||||| | || ||| ||| || ||||| ||||||
Sbjct 58331 CTGAACTCATTTGTGAACGACATATTTGAGCGCGTCGCAACTGAGGCATCCAAGCTGGCG 58272
Query 725040 CGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATC 725099
| ||||||| || ||| ||||||||||||||||| | || || || |||
Sbjct 58271 GCGTACAACAAGAAGTCGACCATCTCATCGCGCGAGATCCAGACCTCTGTCCGGCTCATC 58212
Query 725100 ATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| |||||| ||||||| ||| || || || || |||||||
Sbjct 58211 CTGCCCGGCGAGCTGGCCAAGCATGCTGTGTCTGAAGGCACCA 58169
>seq1295
Length=44835
Score = 86.0 bits (94), Expect = 9e-11
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 262878 CTGGGACTGGGACGCACTGCGGGCGTCGGTTCGACAGCATGGCCTGCGCAACTCGTTGCT 262937
|||||||||||| |||| |||| | || |||||| || | |||||||| |||||
Sbjct 16691 CTGGGACTGGGATTCACTCAAGGCGAAGATTGCACAGCACGGAGTCCGCAACTCATTGCT 16632
Query 262938 CGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCGA 262997
||||||| |||||| || || |||| ||||||||| ||||| || || |||||
Sbjct 16631 GGTGGCGCCCATGCCAACAGCGTCGACTTCGCAGATCATGGGCTTCAATGAATGTTTCGA 16572
Query 262998 GGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTCAA 263057
| ||| ||||| |||| || || || || | ||||| || ||||||||
Sbjct 16571 GCCGTACACTTCGAACATTTACAGTCGTCGTGTTCTAGCTGGCGAGTTCCAGGTGGTCAA 16512
Query 263058 CC 263059
||
Sbjct 16511 CC 16510
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177648871556646
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |