Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02-
24] 1,683 sequences; 26,819,972 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq990 152 4e-32
>seq990
Length=11377
Score = 152 bits (168), Expect = 4e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || |||||||| ||||||||| | || || || ||||| ||| || |
Sbjct 10786 ATGCAGATCTTCGTCAAAACTCTCACCGGCAAGACCATCACCCTAGAAGTCGAATCGAGC 10845
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| ||||||| | || || || ||||||||||| || |||||||| || || ||
Sbjct 10846 GATACGATTGACAACGTGAAGTCGAAGATTCAAGACAAGGAGGGCATACCTCCAGACCAG 10905
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | ||||| | ||| ||||| |||||||||||| || ||| | || || |||||
Sbjct 10906 CAGAGATTAATCTTCGCGGGCAAGCAATTGGAAGACGGTAGGACGTTGTCAGACTACAAT 10965
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| ||||| ||| | |||||||| ||||| |||| || ||
Sbjct 10966 ATTCAGAAGGAAAGCACCCTGCATTTGGTGCTGCGTCTGCGTGGCGG 11012
Score = 131 bits (144), Expect = 1e-25
Identities = 169/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| |||||||| ||||||||| | || ||||| ||||| ||| |
Sbjct 10558 ATGCAAATCTTTGTTAAAACTCTCACCGGCAAGACCATCACTCTAGAAGTCGAATCAAGT 10617
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| |||| || | || || || |||||||||||||| || || || || || |||
Sbjct 10618 GATACGATAGACAACGTGAAGTCGAAGATTCAAGACAAAGAGGGTATTCCGCCTGACCAA 10677
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166
|| | |||| | ||||||||| ||| ||||||| | || |||| || || |||||
Sbjct 10678 CAAAGACTAATCTTCGCCGGCAAGCAACTGGAAGA-TGGGAGAACGTTGTCAGACTACAA 10736
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||| ||||| || ||||| ||||| ||||| | || ||||| ||
Sbjct 10737 CATTCAGAAGGAAAGTACATTACACTTGGTCCTGCGTCTCCGTGGTGGTAT 10787
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || ||||||||||| | || || ||||| || || |||||
Sbjct 10330 ATGCAGATCTTTGTCAAGACACTGACCGGCAAAACCATCACACTTGAGGTTGAGTCGTCC 10389
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || ||| ||||| ||||| ||||| || || || || || ||
Sbjct 10390 GACACCATCGACAACGTGAAATCGAAAATCCAAGATAAAGAGGGTATCCCTCCGGACCAG 10449
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| || || | ||| |||||||| | || || | ||| | || || ||||||
Sbjct 10450 CAGCGCTTGATTTTCGCTGGCAAACAGCTTGAGGATGGCCGCACCCTCTCTGACTACAAC 10509
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||||| || ||| | || | || ||||| | || ||||| ||
Sbjct 10510 ATTCAAAAAGAAAGTACCCTCCACCTTGTCCTGCGTCTCCGTGGTGGTAT 10559
Score = 102 bits (112), Expect = 7e-17
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071
||||||||| | || ||||| || || || |||| ||| |||| || | |||||
Sbjct 10126 ACCGGCAAGACCATCACTCTCGAGGTCGAGTCGTCGGACACGATCGATAATGTCAAGAGC 10185
Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131
|| ||||||||||| ||||| || || || ||||| || || | || | |||||||||
Sbjct 10186 AAGATTCAAGACAAGGAAGGTATCCCTCCAGATCAGCAACGCCTGATCTTCGCCGGCAAG 10245
Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191
||| | ||||| | || | ||| |||||||||||||||||| || | |||
Sbjct 10246 CAACTCGAAGATGGCCGCACTCTGAGCGACTACAACATTCAAAAGGAGAGCACGCTTCAT 10305
Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217
| || |||| |||| ||||| ||
Sbjct 10306 CTTGTACTGCGCCTGCGTGGTGGTAT 10331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434909250404160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |