Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02-
24] 1,683 sequences; 26,819,972 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq990 98.7 7e-16
>seq990
Length=11377
Score = 98.7 bits (108), Expect = 7e-16
Identities = 126/171 (74%), Gaps = 2/171 (1%)
Strand=Plus/Plus
Query 23633 TCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA-AATATTAAAA 23691
|||| || || || ||||||||||| || || || ||||||| | || ||| | || |
Sbjct 10124 TCACCGGCAAGACCATCACTCTCGAGGTCGAGTCGTCGGACACGATCGATAATGTCAAGA 10183
Query 23692 CAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGC 23751
|| ||| ||||| |||||| | || |||||||| || || | || || ||||||
Sbjct 10184 -GCAAGATTCAAGACAAGGAAGGTATCCCTCCAGATCAGCAACGCCTGATCTTCGCCGGC 10242
Query 23752 AAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAG 23802
|| ||||| ||||| | |||||| | |||| |||||||| ||||| |||
Sbjct 10243 AAGCAACTCGAAGATGGCCGCACTCTGAGCGACTACAACATTCAAAAGGAG 10293
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || || |||||||| ||||| || || || |||||||| ||||| || || |
Sbjct 10558 ATGCAAATCTTTGTTAAAACTCTCACCGGCAAGACCATCACTCTAGAAGTCGAATCAAGT 10617
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || | || | | || || ||| |||||||| ||| | ||||| || |||
Sbjct 10618 GATACGATAGACAACGTGAAGTCGAAGATTCAAGACAAAGAGGGTATTCCGCCTGACCAA 10677
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| | |||| || |||||||| ||||||||||| | | || || || ||||||
Sbjct 10678 CAAAGACTAATCTTCGCCGGCAAGCAACTGGAAGATGGGAGAACGTTGTCAGACTACAAC 10737
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819
|| || || || |||||||| || ||
Sbjct 10738 ATTCAGAAGGAAAGTACATTACACTTGGT 10766
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338002666894964
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |