Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02-
24] 1,683 sequences; 26,819,972 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq1295 154 2e-32
seq959 122 1e-22
>seq1295
Length=44835
Score = 154 bits (170), Expect = 2e-32
Identities = 1166/1854 (63%), Gaps = 62/1854 (3%)
Strand=Plus/Plus
Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431
|||| ||||| || || || | || || | ||||||| || |||||||| |||||||
Sbjct 16168 CAACAGTGAATTGGATCGGTGCCGAGGCCGCCATTGTACGGAGGTAGTACATGCCAGTTT 16227
Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491
| || |||| |||| ||| |||||||||||| || | || | || ||
Sbjct 16228 TGAGGCCCAATTTCCAACCGGTGAAATGCATGCTGGTGATCTTACCCATGGTGGGTTCTT 16287
Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551
|| |||||||| | ||| ||| ||| |||||||| || || | ||||| ||||| |
Sbjct 16288 TCATGTGAATATTTAGCGAATGAGATTGGTCGATGAATGCGCCGCGGTCAGCAGCCATCT 16347
Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 75611
| ||| ||| |||||||| | ||| ||| ||| ||||| |||||||
Sbjct 16348 GCACAATATGACGCTGACTGATTTCCCATACAGTCTTGTAAAGGGCTTTGAGGTCATCTG 16407
Query 75612 GAAGATTTGTATTT---TGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668
||| || | | |||| || |||||||| | || || ||||| || | |
Sbjct 16408 GAATGTTCGGGATGCGCTGAACAGACCCGCCATCTGCAATGATGCGGTTCTTCATGTTGT 16467
Query 75669 CATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATT 75728
| ||| | | ||| | | | || | || || || | || || |
Sbjct 16468 CTGACCAGAGACCGCGATCGACAAGGTCCTTTAGCAACCATGGGTTGACCACCTGGAACT 16527
Query 75729 CTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGT 75788
| |||| | || | ||| ||||||| || || || || || | | ||||||||
Sbjct 16528 CGCCAGCTAGAACACGACGACTGTAAATGTTCGAAGTGTACGGCTCGAAACATTCATTGA 16587
Query 75789 TTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGA 75848
|||| || || | ||| || || || ||||| || ||||||| || || | ||
Sbjct 16588 AGCCCATGATCTGCGAAGTCGACGCTGTTGGCATGGGCGCCACCAGCAATGAGTTGCGGA 16647
Query 75849 GACCATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACA 75907
|| || ||| | || || | || || | | ||| ||||| ||||| | |||
Sbjct 16648 CTCCGTGCTGTGCA-ATCTTCGCCTTGAGTGAATCCCAGTCCCAGAGATCGGTTGGCGTC 16706
Query 75908 ACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCG 75967
|| |||| | |||||||| || || ||||| || || ||| || || ||
Sbjct 16707 ACGCCCCACATGTCGTATTGCAGTTCCCCTTTGCTGACAGGGGAGCCAGCGTAAGTCTCA 16766
Query 75968 TAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTT 76027
|| | ||| | || || |||||||| ||||| ||||| |||| |||||| ||
Sbjct 16767 TATGGACCGAGTTGCTCCGCCAGTTCGCAGGAGGCCTCCAACGCTCCGTGATAAATGGTC 16826
Query 76028 TCGAAAATCTTCTTATTAAGA--TCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAA- 76084
||||| |||| | || || |||||| ||| || || || || ||| ||
Sbjct 16827 TCGAAGATCTGAATGTTTAGCCGTCTTGC--TTCGGGAGAGTCGAACGGC--ATGCGAAG 16882
Query 76085 AG-AATAAATGCATCTGCTAGTCC-CTGAACTCCAATACCAATAGGTCTATGTCTCTTAT 76142
|| || || ||||| || || || |||| |||| ||||| || | || | ||
Sbjct 16883 AGCAAGGAAAGCATCGGCCAGGCCACTGACACCCAAG-CCAATCGGGCGGTGGCGTAAAT 16941
Query 76143 TGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTC 76202
|| | ||||||||| | || |||| || ||||| ||||| || || | |||
Sbjct 16942 TGCTCTTGCGAGCTTCTGGCACGGGATAATGGTTGATATCGATAATCTTGTTCAAGTTTT 17001
Query 76203 TGACAACTACTTTAACCACGTCCTTTAGTTT---GAGA----AAATCAAATTTTCCATCT 76255
| ||| || ||| || || | ||||| || | || || |||||| ||
Sbjct 17002 TCGTAACCACCTTAGTAACTTCATGAAGTTTCTTGAAATTGTAACTCTCATTTTCAAT-- 17059
Query 76256 ATCACAAACATAT---TAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCA 76312
||| || || | ||| ||| | ||||| ||||| || || || ||||||| ||
Sbjct 17060 ATC-CACGTATGTGGGTAA-AGCCAGGGATGCAAGATTGCAGACAGCGACCTCATCAGG- 17116
Query 76313 TTGGCA---TATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTT 76369
|||| || | || ||||| ||||| || || | | || || ||||| |||
Sbjct 17117 --GGCAGTGTACTCCATAATCTCAGTGCACAGGTTGGAAGAGCGAATGGTACCAAGGTTT 17174
Query 76370 TGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACA--AACGGAGTTCCAGTTT 76427
| |||||| ||| |||| | |||||||| | ||| || ||||| || || |
Sbjct 17175 TTCTGGTTGGATTTTCTGTTTGCAGCATCCTTATA--GCACATGAAGGGAGTACCTGTCT 17232
Query 76428 CAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATC 76487
| | || | |||| || | | ||| | | ||| || | || | | |
Sbjct 17233 CCGTTTGAGCCTCGAGGATTGCGTACCATA-GTTTCT-GCGCACGC-ACAGTCTCGCGAC 17289
Query 76488 ---GCTTCTCTCTTTCATATTGT--GTATATAACCGTTCAAATTCATCTCCCCAAACATC 76542
| ||| | ||| |||||| ||| | | || || || | || || | |||||
Sbjct 17290 CACGACCCTCGCGTTCGTATTGTTCGTAGAGAGCC--TCGAACTTTTCCCCATACACATC 17347
Query 76543 ATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCG 76602
| | | ||||| ||||| | |||||||||||| | ||| | | | || |||||
Sbjct 17348 AGCAAGGCCAGGGCATTCGTGCGGACACATCAAAGTCCATGTGCTGTTCTGCTCCACCCG 17407
Query 76603 TTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTC 76662
|||||| || | || || ||||| || || || || || || | | ||||||
Sbjct 17408 TTTCATGAACAAGTCTGGGATCCAAAGCGCGTAGAAAAGGTCGCGAGCACGGACTTCTTC 17467
Query 76663 ATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAG 76722
|| || ||||| || || ||||| | || || | |||||| || || ||
Sbjct 17468 TTTGCCATGGTTCTTGCGCAGGTCGAGGAAGGAGAATATGTCCGCATGCCACGGCTCAAG 17527
Query 76723 ATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTT 76782
||| || || | |||| || || || || || || ||||| | ||| | ||||||||
Sbjct 17528 ATAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCTTGATCGACATACCGCGCAGTGTT 17587
Query 76783 ATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATA 76842
|| || || | | ||| || | | ||||| || || |||||||| ||| ||||||
Sbjct 17588 GTTGTATACACGAAGCATAGGTACCAATCCGTTTGAAGTTCCATTTGTGCCACCAATATA 17647
Query 76843 ACTTCCACATGCACGAATAT----TACTAATAGATAGGCCTATTCCTCCTGCCATTTTAG 76898
|| ||| ||||| ||| || || | ||||| || || || | || |
Sbjct 17648 CGACCCTGTTGCGCGAATGCGGTGTAC--ATTGAGA--CCTATACCACCAGCATTCTTTG 17703
Query 76899 AGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGT 76958
|||| | || || ||||| |||||||| |||||||| ||||| || ||| ||||||
Sbjct 17704 AGATCATGGCGCATGTTTTCAGAGTGTCATAAATGCCCTCGATACTGTCCTCCTTCATGT 17763
Query 76959 TAAGAAGAAAACAGCTAGACATTTGAT--GATGAACAGTTCCTGCATTAAACAATGTAGG 77016
|| | ||||| || || ||| |||| || || || | |||| || ||
Sbjct 17764 CAATCAAGAAACATGAAGCCAATTGGGCGGATGGT--GTGCCGGCCATGAACAGGGTTGG 17821
Query 77017 AGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTAT 77076
|| ||||||||||| | || | || | || ||||| || || || | || || ||
Sbjct 17822 TGAAGCATGAGTGAAGTACTTGTTCGACATGAGGTTGTAGGTCTCGATTGCAGCCTCGAT 17881
Query 77077 ATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGT 77136
|| || || || || || |||||||| | ||| || || |||| ||| || |
Sbjct 17882 GTCTTCGCCGTGTATACCCACCGCAACACGCATGATCATGTGTTGCGGTCTCTCTGCAAT 17941
Query 77137 CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATA 77190
|| | ||| ||| | ||||| ||| | ||| || || ||||||||
Sbjct 17942 TTTCCCGTCAATTCTCAGGAGATATGAGCGTTCAAGAGTCTTGAAGCCAAAATA 17995
>seq959
Length=28360
Score = 122 bits (134), Expect = 1e-22
Identities = 341/517 (66%), Gaps = 10/517 (2%)
Strand=Plus/Minus
Query 46672 TCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCG 46731
||||| ||||| || || || ||||| || ||||||||||||||||| || || | |||
Sbjct 16135 TCGTTGGAAAAGGTCAGACCGGGCATGAGACCACGCTTTTTGAGCCAGAAAATGGATGCG 16076
Query 46732 AAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAA 46791
|| || | ||| ||||| ||||| |||||||| ||||| || || || | ||| |
Sbjct 16075 AAGGAGCTAGAGAAGAAAATGCCCTCTACAGCGGCGAAAGCAACGAGACGACAGCCGAAC 16016
Query 46792 CTGGCATCATTAT---GAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGC 46848
| | || |||| |||||| | | |||||||| ||||| || | || ||
Sbjct 16015 GTCGAATTCTTATCGCTAATCCATCGCAGCGCCCAATCCGCCTTCTTACCGATGCATGGG 15956
Query 46849 ATTGTTTCTATAGCATTAAAGAGA-AAGtttttttCATCACTATCTTTAACATATGTATC 46907
|| | || || || || || ||| | || || || | || | | || || ||
Sbjct 15955 ATGTTGTCGATGGCGTTGAATAGATACGTGCGTTGTTTCGGT-TCGCTGATGTAGGTGTC 15897
Query 46908 TATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAA 46967
|| | ||| || | || || || || || || || ||||| || ||||| ||
Sbjct 15896 GATGAGCAGAGAGTAAGTCTCAGAGTGGATATTCTCCATCATGATCTGGAAGCCGTAGAA 15837
Query 46968 ACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGAC-AAATTCTCATTCA 47026
|| | |||||| | || || ||||| | | ||||| || ||| | ||||| || |
Sbjct 15836 GCAGCGTGCTTCGGGTATTTGCACCTCGGCTGAGAATCGCTC-GACGAGGTTCTCGTTGA 15778
Query 47027 CTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGG 47086
| || || || || |||||||| || | ||||| || || | || ||
Sbjct 15777 CAATCCCGTCTGATGCCGCAAAAAAGGCGAGGACATGAGAGATGAAGAAACGCTCGTCAT 15718
Query 47087 TAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCC 47143
| ||| | || |||||||||| | ||||||||| | ||| | || || || ||||
Sbjct 15717 CATTCAGGCGCTTGTTCCAGTCATGCAAATCTTTTGAAAGATCGATCTCCTCGGCCGTCC 15658
Query 47144 AGAATGACGCCTCTGCTTTTTTATACATATTCCATAT 47180
|||| || || || || || || ||||| | ||||||
Sbjct 15657 AGAAGGAGGCTTCCGCCTTCTTGTACATTTGCCATAT 15621
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712919401642560
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