Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02- 24] 1,683 sequences; 26,819,972 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq990 95.1 1e-14 >seq990 Length=11377 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/234 (69%), Gaps = 1/234 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || || |||||||| | |||||||| ||||| ||| | ||| ||| | ||| Sbjct 10786 ATGCAGATCTTCGTCAAAACTCTCACCGGCAAGACCATCACCCTAGAAGTCGAATCGAGC 10845 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | | || || || ||| ||||| || ||| | || || || Sbjct 10846 GATACGATTGACAACGTGAAGTCGAAGATTCAAGACAAGGAGGGCATACCTCCAGACCAG 10905 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || || | || | |||||||| ||||||||||| || || || | || || ||| Sbjct 10906 CAGAGATTAATCTTCGCGGGCAAGCAATTGGAAGACGGTAGGACGTTGTCAGACTACAAT 10965 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG-CAATAA 111332 || || || ||| || || ||||| ||| |||||||||| || || |||||| Sbjct 10966 ATTCAGAAGGAAAGCACCCTGCATTTGGTGCTGCGTCTGCGTGGCGGTCAATAA 11019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421802547993208