Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02-
24] 1,683 sequences; 26,819,972 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq1047 127 2e-24
seq990 125 7e-24
>seq1047
Length=44052
Score = 127 bits (140), Expect = 2e-24
Identities = 100/120 (83%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|||||||| || ||||||||||||||||| ||||| |||||||||||||| | || |||
Sbjct 5394 ACCAGATGAAGAGTGCTCTCCTTCTGAATATTATAATCGGAGAGGGTGCGACCATCCTCG 5453
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
|||||||||||||| || ||||| ||||| ||||||| || | | ||| ||||| |||
Sbjct 5454 AGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGTGGGATACCCTCTTTGTCTATG 5513
>seq990
Length=11377
Score = 125 bits (138), Expect = 7e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || || || || || || || || |||||||| ||||| |||
Sbjct 10556 CCACCACGGAGACGCAGGACAAGGTGGAGGGTACTTTCTTTTTGAATGTTGTAGTCAGAG 10497
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || ||||| ||||| ||||| |||| |||||| ||||||| ||
Sbjct 10496 AGGGTGCGGCCATCCTCAAGCTGTTTGCCAGCGAAAATCAAGCGCTGCTGGTCCGGAGGG 10437
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | ||| || | | || |||| | || ||| | | | |||||| |||||| ||
Sbjct 10436 ATACCCTCTTTAT-CTTGGATTTTCGATTTCACGTTGTCGATGGTGTCGGACGACTCAAC 10378
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || || ||||| || ||||| ||||| || || ||||||||
Sbjct 10377 CTCAAGTGTGATGGTTTTGCCGGTCAGTGTCTTGACAAAGATCTGCAT 10330
Score = 111 bits (122), Expect = 1e-19
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
||||| || ||||| | ||||| |||||| ||||| ||||||||||| || ||||| ||
Sbjct 11012 CCGCCACGCAGACGCAGCACCAAATGCAGGGTGCTTTCCTTCTGAATATTGTAGTCTGAC 10953
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| || | |||| || | |||||||| ||||| || | | ||| ||||| | ||
Sbjct 10952 AACGTCCTACCGTCTTCCAATTGCTTGCCCGCGAAGATTAATCTCTGCTGGTCTGGAGGT 10893
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| || |||||||| | ||| | || | |||| ||| | | | || |||||||| || |
Sbjct 10892 ATGCCCTCCTTGT-CTTGAATCTTCGACTTC-ACGTTGTCAATCGTATCGCTCGATTCGA 10835
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| || | || || || || || || || || || ||||| ||||||||
Sbjct 10834 CTTCTAGGGTGATGGTCTTGCCGGTGAGAGTTTTGACGAAGATCTGCAT 10786
Score = 98.7 bits (108), Expect = 9e-16
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | || ||||| |||||||||||||| |||||||| ||||||
Sbjct 10328 CCACCACGCAGGCGCAGTACAAGATGAAGCGTGCTCTCCTTTTGAATGTTGTAGTCGCTC 10269
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || ||||| |||||||||||||| |||||||| || || || | ||
Sbjct 10268 AGAGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGATCTGGAGGG 10209
Query 41756 ACGCTCTCCTTGTC 41769
| | ||||||||
Sbjct 10208 ATACCTTCCTTGTC 10195
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462294274279600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |