Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq5 82.4 9e-11 seq4 82.4 9e-11 >seq5 Length=5645814 Score = 82.4 bits (90), Expect = 9e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194 || ||||| || ||| ||||||||||| | || | ||||||||||| || || Sbjct 2728200 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAAAAGGTCAGG 2728259 Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254 |||||||| ||||| ||||| || ||||| || ||||||||||| | || ||||| Sbjct 2728260 CCGGGCATCAGGCCGCGCTTCTTGAGCCAGAAGATGGACGCAAAGGCACCGCTGAAGAAG 2728319 Query 24255 ATTCCTTCTACTGCCGCAAAGGC 24277 || || || || || || || || Sbjct 2728320 ATACCCTCAACGGCAGCGAAAGC 2728342 >seq4 Length=5903436 Score = 82.4 bits (90), Expect = 9e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 52796 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 52855 |||| ||| | |||||| || |||||||||| || | | ||||| || ||||||||| Sbjct 5784640 TCCTGGTCAACTGTGAACTGGATGGGAGCGGCGGCCGCCTGGGTACGCAGGTAGTACATT 5784581 Query 52856 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTC 52915 ||||| || |||||||| |||| || || ||||| || || | ||| | Sbjct 5784580 CCCGTCTTGAGACCGAGCTTCCAGCCCGCGAAGTGCATGCTGGTGATCTTGCCCATGGTG 5784521 Query 52916 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 52975 || || |||||||| |||| || || || ||||||||||| || | ||| || Sbjct 5784520 GGGTCCTTCATATGGATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCGCGGTCAGCG 5784461 Query 52976 GCCAT 52980 ||||| Sbjct 5784460 GCCAT 5784456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721533206320