Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq5 179 4e-40 seq3 159 4e-34 seq6 138 1e-27 >seq5 Length=5645814 Score = 179 bits (198), Expect = 4e-40 Identities = 313/450 (70%), Gaps = 4/450 (1%) Strand=Plus/Minus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| | ||||||||| ||| || ||| | |||||| ||| | Sbjct 2728407 AGAAGGCCGATTGGGCTATTCGCTGGATCACCGACAAGGAGTCTACCTTCGCGTCGCGTC 2728348 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 |||| || ||||| ||||| ||||| ||||||| || || || |||| || | Sbjct 2728347 TGGTCGCTTTCGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCGTCCATCTTCT 2728288 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| |||||||| |||||||||||||| || ||||||||||||||| | | Sbjct 2728287 GGCTCAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTTTCCAACGAGCTCATCTCGCGTG 2728228 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 |||||||||| || ||||| ||||| |||| ||| || | |||| |||| Sbjct 2728227 ACGAGGGTCTCCACACTGACTTCGCCTGCCTGCTCTTCTCCCACCTCAACAAGCGCCCGA 2728168 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 || | || ||| ||| || ||| || ||| ||||||||| ||||||| Sbjct 2728167 GCAAACAGATGATCCAGGACATCATCGTCGATGCTGTCAAAATCGAGCAGGAGTTCCTCA 2728108 Query 117282 CCGAAGCGCTGCCGGTGC-GTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACAT 117339 ||||||| || || ||| ||||||| || | || | | | | ||| ||| ||||| Sbjct 2728107 CCGAAGCTCT-CCCCTGCGGTCTGCTCGGCATGAACT-CTACTCTCATGAAGCAGTACAT 2728050 Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCC 117399 ||||| || |||||| | || || ||| || | | || ||| |||||| | Sbjct 2728049 TGAGTTTGTTGCCGACCGTCTCCTCGTCGCCCTCGGCAACGAGAAGGTCTACAAGGTCAC 2727990 Query 117400 CAACCCGCTGGACTTTATGAACCTCATCTC 117429 |||||| | ||||| ||| | |||||| Sbjct 2727989 CAACCCCTTCGACTTCATGGAGAACATCTC 2727960 Score = 168 bits (186), Expect = 7e-37 Identities = 212/286 (74%), Gaps = 5/286 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||| | ||||||| | |||||| Sbjct 2728814 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACTGCCGAGGAGATCGACCTG 2728755 Query 116696 TCCAAGGA-CACGAGCGACTGGGAGCGCTTGAACGACAACGA-GCGCCAT--TTCATCAA 116751 |||||||| | | | ||| ||| | | || | || | || | | || |||||| Sbjct 2728754 TCCAAGGATCTCCA-CGATTGGAACAACAAGATCAACGATGATGAGAAATACTTCATCTC 2728696 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||| | ||||| || ||||||||| ||||||||| ||||||||||| || |||||||| Sbjct 2728695 TCACATCCTGGCTTTCTTCGCCGCCTCCGACGGCATTGTCAACGAGAACCTCGTCGAGCG 2728636 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| ||||| ||| | ||||||| || |||||||||||||| |||||| || Sbjct 2728635 TTTTAGCGGCGAGGTCCAGATTCCCGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGAT 2728576 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 ||||||| | ||||| || | || || ||||| || || ||| Sbjct 2728575 GGAGAACATCCACTCCGAGACCTACTCCCTGCTCATTGATACCTAC 2728530 Score = 127 bits (140), Expect = 2e-24 Identities = 139/182 (76%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| || |||||| |||| || || | | |||| | | Sbjct 3291479 TTCGTGAAGACCCTTACGGGCAAGACTATCACCCTCGAGGTGGAGTCTTCGGACACCATT 3291420 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| |||||||||||| | |||||||| || || Sbjct 3291419 GACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCT 3291361 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| ||||| ||||| || || | ||||||||| |||||||||||||||||| Sbjct 3291360 GATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAA 3291301 Query 40878 GG 40879 || Sbjct 3291300 GG 3291299 >seq3 Length=5970797 Score = 159 bits (176), Expect = 4e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || |||||||| || || |||||| | || || || | || Sbjct 631135 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCGTCC 631076 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| |||||||||||| | |||||| Sbjct 631075 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 631016 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || |||| ||||||||| |||||||||| Sbjct 631015 CAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTACAAC 630956 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGGC 40920 |||||||||||| |||| || || || ||| ||||| | | || |||||| Sbjct 630955 ATCCAGAAGGAGTCCACCCTTCACCTCGTGCTGCGCCTCCGTGGTGGCGGC 630905 >seq6 Length=5170228 Score = 138 bits (152), Expect = 1e-27 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| | || || || || | Sbjct 5051686 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTGGAGTCCTCG 5051745 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| || || | ||||| |||||||| ||| | || || Sbjct 5051746 GATACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGATCA 5051804 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||| | ||| || || ||||| || |||| |||||||| | ||||||||| Sbjct 5051805 GCAGCGTCTCATTTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTAAGCGACTACAA 5051864 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| ||||||| || || || Sbjct 5051865 CATCCAGAAGGAGTCCACGCTCCACCTGGT 5051894 Score = 138 bits (152), Expect = 1e-27 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| | || || || || | Sbjct 5110924 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTGGAGTCCTCG 5110865 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| || || | ||||| |||||||| ||| | || || Sbjct 5110864 GATACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGATCA 5110806 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||| | ||| || || ||||| || |||| |||||||| | ||||||||| Sbjct 5110805 GCAGCGTCTCATTTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTAAGCGACTACAA 5110746 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| ||||||| || || || Sbjct 5110745 CATCCAGAAGGAGTCCACGCTCCACCTGGT 5110716 Score = 129 bits (142), Expect = 6e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| || || |||||||| | || ||||| | | Sbjct 5110411 ATGCAGATTTTCGTCAAGACCCTCACCGGAAAGACCATCACTCTGGAAGTCGAGTCTTCT 5110352 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || || | ||||| ||||||||||| | ||||| Sbjct 5110351 GACACAATCGACAACG-TGAAGAGCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCA 5110293 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| |||||||| ||| |||| || | |||||||| |||||||| Sbjct 5110292 GCAGCGCCTCATCTTTGCGGGCAAGCAGTTGGAAGATGGCCGCACCCTGTCTGACTACAA 5110233 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || |||||||| || Sbjct 5110232 CATCCAGAAGGAGTCTACCCTGCATCTCGT 5110203 Score = 113 bits (124), Expect = 5e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759 |||| || || || || || || |||||||| |||| ||||| | |||| | | | Sbjct 5110629 TCGTCAAGACCCTGACCGGAAAGACCATCACTCTCGAGGTCGAGTCTTCCGATACCATCG 5110570 Query 40760 A-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | |||| ||||| || || | ||||| ||||| ||||| | |||||||| || || Sbjct 5110569 ACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAGCAGCGTCTG 5110511 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 || | ||| ||||| || || || || | ||||||||| ||||||||| ||||||||| Sbjct 5110510 ATTTTCGCCGGCAAGCAACTTGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAG 5110451 Query 40879 GAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||| |||| || || || ||| | || || | || ||| Sbjct 5110450 GAGTCCACCCTCCACCTGGTGCTCCGTCTGCGTGGTGGC 5110412 Score = 109 bits (120), Expect = 6e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| ||||| || || ||| | || |||||| | || Sbjct 5110183 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACTATTACCCTGGAAGTCGAATCGTCC 5110124 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || || | || || ||||| || || | ||||| Sbjct 5110123 GACACGATCGATAACG-TGAAGTCGAAGATCCAGGATAAGGAGGGTATTCCTCCTGACCA 5110065 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| || || |||||||| || | || ||||| || ||||| Sbjct 5110064 GCAGCGCCTGATCTTCGCTGGAAAGCAGCTGGAAGATGGACGTACCCTGTCGGATTACAA 5110005 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| | || |||||||| || |||| | | |||||| Sbjct 5110004 CATCCAGAAGGAGTCGACTCTGCATCTCGTCCTGCGTCTTCGTGGCGGC 5109956 Score = 107 bits (118), Expect = 2e-18 Identities = 138/188 (73%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759 |||| || || || || || || |||||||| |||| ||||| | |||| | | | Sbjct 5051981 TCGTCAAGACCCTGACCGGAAAGACCATCACTCTCGAGGTCGAGTCTTCCGATACCATCG 5052040 Query 40760 A-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | |||| ||||| || || | ||||| ||||| ||||| | |||||||| || || Sbjct 5052041 ACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAGCAGCGTCTG 5052099 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 || | ||| ||||| || || || || | ||||||||| ||||||||| ||||||||| Sbjct 5052100 ATTTTCGCCGGCAAGCAACTTGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAG 5052159 Query 40879 GAGGCCAC 40886 ||| |||| Sbjct 5052160 GAGTCCAC 5052167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219142037840