Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq6 109 6e-19 seq3 109 6e-19 seq5 91.5 2e-13 >seq6 Length=5170228 Score = 109 bits (120), Expect = 6e-19 Identities = 165/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 42949 CCTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGT 43008 |||| || || || | | ||||| || | ||||| || |||||| || || |||| Sbjct 5109949 CCTACTGGCCGCCACGAAGACGCAGGACGAGATGCAGAGTCGACTCCTTCTGGATGTTGT 5110008 Query 43009 AATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGT 43068 |||| | ||| || || | || || |||||||| |||||||| || || |||||||||| Sbjct 5110009 AATCCGACAGGGTACGTCCATCTTCCAGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGT 5110068 Query 43069 CGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCG 43128 | | || | | |||||| ||| ||| || || | | | | ||||||| || Sbjct 5110069 CAGGAGGAATACCCTCCTTATCCTGGATCTTCGACTTCACGTTATCGATCGTGTCGGACG 5110128 Query 43129 ATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || | || || || ||||| || || ||||| |||||||| ||||| Sbjct 5110129 ATTCGACTTCCAGGGTAATAGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 5110183 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || |||| || ||||||||||||||||| Sbjct 5051877 CTCCTTCTGGATGTTGTAGTCGCTTAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 5051818 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| |||||||| |||| || | || |||||||||| ||| || |||| ||| Sbjct 5051817 AATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 5051759 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | || || || ||||| || | |||||||| ||||| || || ||||| | Sbjct 5051758 TGTCAATGGTATCCGAGGACTCCACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGA 5051699 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 5051698 CGAAGATCTGCAT 5051686 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || |||| || ||||||||||||||||| Sbjct 5110733 CTCCTTCTGGATGTTGTAGTCGCTTAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 5110792 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| |||||||| |||| || | || |||||||||| ||| || |||| ||| Sbjct 5110793 AATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 5110851 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | || || || ||||| || | |||||||| ||||| || || ||||| | Sbjct 5110852 TGTCAATGGTATCCGAGGACTCCACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGA 5110911 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 5110912 CGAAGATCTGCAT 5110924 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| |||| ||| || || | || || | |||||| || || || Sbjct 5110220 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAACTGCTTGCCCGCAAA 5110279 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | || |||||||||| ||| || || | ||| Sbjct 5110280 GATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTCA-CGT 5110338 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || || || || | |||||||| || || || || ||||| | Sbjct 5110339 TGTCGATTGTGTCAGAAGACTCGACTTCCAGAGTGATGGTCTTTCCGGTGAGGGTCTTGA 5110398 Query 43171 CAAAGATTTGCAT 43183 | || || ||||| Sbjct 5110399 CGAAAATCTGCAT 5110411 Score = 84.2 bits (92), Expect = 3e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||| || | ||| |||||| || |||||||| || | || || || | Sbjct 5110424 ACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCC 5110483 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || || ||||| || ||||| || || ||||||||||||| || | | |||||| Sbjct 5110484 ATCCTCAAGTTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCGGGAGGGATACCCTCCTT 5110543 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| ||| || |||| ||| | | | || ||| || || || |||| |||| Sbjct 5110544 GTCCTGGATCTTCGACTTGA-CGTTGTCGATGGTATCGGAAGACTCGACCTCGAGAGTGA 5110602 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTAC 43171 |||| || || || || ||||| || Sbjct 5110603 TGGTCTTTCCGGTCAGGGTCTTGAC 5110627 >seq3 Length=5970797 Score = 109 bits (120), Expect = 6e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| ||| | || | ||| |||||| || || ||||| || | || || || || Sbjct 630921 CGCAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCG 630980 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || |||||||| || ||||| || || ||||||||||||| || | || ||||||| Sbjct 630981 TCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTG 631040 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 ||| ||| || |||| | | | |||||| ||| ||||| || | ||||| Sbjct 631041 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCCACCTCAAGGGTGATA 631100 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || ||||| || ||||| || ||||| ||||| Sbjct 631101 GTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 631135 >seq5 Length=5645814 Score = 91.5 bits (100), Expect = 2e-13 Identities = 131/182 (72%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || | || || || | || || |||||||| || ||||| | Sbjct 3291299 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 3291358 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||||||||||| || | || |||||||||| ||| || |||| ||| | Sbjct 3291359 TCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTG 3291417 Query 43114 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||| || ||||| |||| ||||| || |||||||| || ||||| || Sbjct 3291418 TCAATGGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTAAGGGTCTTCACG 3291477 Query 43173 AA 43174 || Sbjct 3291478 AA 3291479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817535670520