Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq3 125 5e-24 seq6 122 6e-23 seq5 89.7 3e-13 >seq3 Length=5970797 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | |||||| ||||| | || || ||||| |||||||||||||| Sbjct 630909 CCACCACGGAGGCGCAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 630968 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | ||||||||| ||||| || || |||||||||||| ||| Sbjct 630969 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 631028 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | || | |||| ||| || || Sbjct 631029 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCCACC 631088 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || || || ||||| || || || ||||||||||| Sbjct 631089 TCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 631135 >seq6 Length=5170228 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || || || || | ||| || ||||| ||||||||||| ||| Sbjct 5110185 CCACCACGCAGACGAAGGACGAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAC 5110244 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||||||||||||| || || ||||| |||||||||||| || Sbjct 5110245 AGGGTGCGGCCATCTTCCAACTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCGGGAGGG 5110304 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | || | || | || ||||| Sbjct 5110305 ATGCCCTCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATTGTGTCAGAAGACTCGACT 5110364 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| || |||||||| || || || || |||||||| Sbjct 5110365 TCCAGAGTGATGGTCTTTCCGGTGAGGGTCTTGACGAAAATCTGCAT 5110411 Score = 116 bits (128), Expect = 2e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | ||| || || || | ||| || ||||| |||||||| || ||| Sbjct 5109957 CCGCCACGAAGACGCAGGACGAGATGCAGAGTCGACTCCTTCTGGATGTTGTAATCCGAC 5110016 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| |||||| || ||||| || || ||||||||||| || Sbjct 5110017 AGGGTACGTCCATCTTCCAGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCAGGAGGA 5110076 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||| || ||||| ||| | | | |||| |||| ||||||||| Sbjct 5110077 ATACCCTCCTTATCCTGGATCTTCGACTTCACGTTATCGATCGTGTCGGACGATTCGACT 5110136 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || || || ||||||||||| || || |||||||||||||| Sbjct 5110137 TCCAGGGTAATAGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 5110183 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || |||||||| | || || ||||| |||||||||||| Sbjct 5051912 CCACCGCGAAGACGGAGAACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTT 5051853 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | |||||| || ||||||||||| |||||||| ||| ||| Sbjct 5051852 AGGGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCGGGGGGA 5051793 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | || | ||| | || || || Sbjct 5051792 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCCGAGGACTCCACC 5051733 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||| || ||||| || || ||||||||||| Sbjct 5051732 TCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 5051686 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || |||||||| | || || ||||| |||||||||||| Sbjct 5110698 CCACCGCGAAGACGGAGAACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTT 5110757 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | |||||| || ||||||||||| |||||||| ||| ||| Sbjct 5110758 AGGGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCGGGGGGA 5110817 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | || | ||| | || || || Sbjct 5110818 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCCGAGGACTCCACC 5110877 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||| || ||||| || || ||||||||||| Sbjct 5110878 TCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 5110924 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||||||||||| | || || ||||| || ||||||||||| Sbjct 5110413 CCACCACGCAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGAG 5110472 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | |||||||| |||||||| || |||||||||||| || Sbjct 5110473 AGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCGGGAGGG 5110532 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | || | ||||| || ||||| Sbjct 5110533 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGGAAGACTCGACC 5110592 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 || | |||||||| || ||||| || || || || Sbjct 5110593 TCGAGAGTGATGGTCTTTCCGGTCAGGGTCTTGAC 5110627 Score = 89.7 bits (98), Expect = 3e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| || ||||||||||| || ||| | || || | |||||||| |||||| Sbjct 5052161 TCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAA 5052102 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || |||||||||||| || | | ||||||||| ||||| ||| | | | Sbjct 5052101 ATCAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTG 5052042 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || | ||||| || ||||| || | |||||||| || ||||| || || || || Sbjct 5052041 TCGATGGTATCGGAAGACTCGACCTCGAGAGTGATGGTCTTTCCGGTCAGGGTCTTGAC 5051983 >seq5 Length=5645814 Score = 89.7 bits (98), Expect = 3e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261 ||||| |||||||||||||| || ||| | || || | ||||||||| ||||| || Sbjct 3291301 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 3291360 Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321 || |||||||||||| ||| | || ||||||||| ||||| ||| | | | | Sbjct 3291361 AGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCA 3291420 Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAA 34380 || | || | || || || || | ||||| || ||||| || || || ||||| || Sbjct 3291421 ATGGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTAAGGGTCTTCACGAA 3291479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071964563040