Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq4 131 4e-25 seq5 111 3e-19 seq6 89.7 1e-12 >seq4 Length=5903436 Score = 131 bits (144), Expect = 4e-25 Identities = 401/617 (65%), Gaps = 21/617 (3%) Strand=Plus/Plus Query 248833 TTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATT 248892 ||||| || |||||| ||| || || ||||| | ||||||||||||| || || | Sbjct 5782815 TTCAAGACCCTGGAGCGATCTTACCTGCTCAAGTTGGATGGCAAGATCGCAGAGCGCCCT 5782874 Query 248893 CAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTC 248952 ||||||||| | ||||| || || ||||| || ||||| | ||| |||| || Sbjct 5782875 CAGCACATGATTATGCGGGTTGCCGTCGGCATCTGGGGTGATGATGTCGAGCGCGTCATC 5782934 Query 248953 GAGACGTACACCGGAATG---AGTGAACGCTGGATGACACATGCCACACCGACGCTCTTC 249009 ||||| |||| | ||| || || || | || |||||| | || || || ||| Sbjct 5782935 GAGACCTACAACCTGATGTCCAGCAAATTCT---TCACTCATGCCTCGCCCACCCTATTC 5782991 Query 249010 AACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGAC 249069 || || || ||| | | ||| ||| || ||||| || | | |||| | || ||| Sbjct 5782992 AATGCGGGCACCCCCCAGGCTCAACTGTCTTCCTGCTTCCTCGTCGACATGAAGGAGGAC 5783051 Query 249070 TCTGTCGACGGCATTTATGACACGCTTAAACAGAC---GGCGAAGATTTCTAAATTCGCG 249126 |||| ||||| || ||||| || | |||| || | |||||| || | || Sbjct 5783052 AGCATCGAGGGCATCTACGACACCCTCA---AGACCTGTGCCATGATTTCCAAGATGGCT 5783108 Query 249127 GGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACA 249186 ||||| || || || |||| | |||||| || | ||||| ||||| || || Sbjct 5783109 GGCGGCATTGGCCTGAACGTCCACCGCATCCGTGCCACTGGTTCTTACATTGCCGGCACC 5783168 Query 249187 AATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTC 249246 || || | | |||||| | ||| | || || || | ||||||| | | Sbjct 5783169 AACGGCACCTCCAACGGTATCATCCCCATGCTGCGTGTGTTCAACAACACCGCCCGCTAT 5783228 Query 249247 ATCAACCAGGCCGG------GCGCCGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGG 249300 || |||||| || ||||| || | |||||||| || | || |||| Sbjct 5783229 GTCGACCAGGGTGGCAACAAGCGCC---CCGGCGCTTTCGCCATCTACCTTGAGCCGTGG 5783285 Query 249301 CACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGA 249360 ||||| ||| | || |||||||||||| || |||||| ||||||| ||| | | Sbjct 5783286 CACGCTGATGTCTTCGAGTTCCTGGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCGT 5783345 Query 249361 GCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCC 249420 || || || || ||| || ||| ||| || |||| | |||||| || ||| || Sbjct 5783346 GCTCGCGATCTATTCCTCGCCCTCTGGATCCCCGATCTCTTCATGAAGCGTGTCGAGAAG 5783405 Query 249421 GACGGCGATTGGACGCT 249437 ||||||| ||||| || Sbjct 5783406 AACGGCGACTGGACTCT 5783422 Score = 93.3 bits (102), Expect = 9e-14 Identities = 198/292 (68%), Gaps = 18/292 (6%) Strand=Plus/Minus Query 254022 GGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAACCCTGTTGGGC 254081 || || || || || |||||||| || |||||||| || || ||||| | | | ||| Sbjct 3021159 GGCCCCCCAGGCACGGGCAAGACCTCCACCATCCTCGCCCTCGCCCGCCGCATCTACGGC 3021100 Query 254082 GAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGTTGGAC 254141 | | |||||| | || || || ||||| ||||| || ||||| || || | ||| Sbjct 3021099 GCCGAAAACATGCGCCAGATGGTCCTTGAGCTCAACGCCTCCGACGACCGTGGCATCGAC 3021040 Query 254142 GTCGTCCGCGACAAGATCAAGACTTT---CTCCAAGATGTCGAT-TTC------GTCGTT 254191 ||||||||||| |||||||||| || ||| | || ||| ||| | || Sbjct 3021039 GTCGTCCGCGAGCAGATCAAGACCTTCGCCTCGACGAAACAGATCTTCACCATGGGCGCC 3020980 Query 254192 CCAACC--CGGCTG-----TC-CGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACC 254243 || || |||| | || || ||||| ||| | ||||| |||||||| ||| || Sbjct 3020979 GCAGCCCGCGGCGGCGGCATCGCGGGCTTCAAACTCATCATCCTCGACGAGGCCGACGCC 3020920 Query 254244 ATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCACTCCG 254295 ||||| | ||| ||| ||||||||||| | ||||||| | || ||| Sbjct 3020919 ATGACCAACACCGCCCAGATGGCCCTCCGCCGCATCATGGAGAAGTACACCG 3020868 >seq5 Length=5645814 Score = 111 bits (122), Expect = 3e-19 Identities = 261/392 (67%), Gaps = 28/392 (7%) Strand=Plus/Plus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| ||| ||||||| ||||| || || || || || |||||||| || || ||| | Sbjct 4169847 TGCTCTTCTACGGTCCCCCCGGTACCGGTAAAACCTCGACCATCCTCGCCCTCGCCAAAG 4169906 Query 254071 CCCTGTTGGGC---GAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACG 254127 || | ||| ||| || || || |||||||||||||| ||||| || |||| Sbjct 4169907 AGCTCTACGGCCCCGAGCTGATCAAGACC---CGCGTGCTCGAGCTCAACGCCTCCGACG 4169963 Query 254128 AACGCGGGTTGGACGTCGTCCGCGACAAGATCAAG-ACTTT------------CTCCAAG 254174 | || || | | |||||||||| ||| ||||| ||||| ||| | Sbjct 4169964 AGCGAGGCATCTCCATCGTCCGCGAGAAGGTCAAGGACTTTGCGCGAATGCAACTCACAA 4170023 Query 254175 AT------GTCGATTTCGTCGTTC-CAACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCT 254227 | | ||| | | | | |||| ||| ||||| |||||| || | ||||| Sbjct 4170024 ACCCCACCGCCGACTACAAGAAGCGCTACCC--CTGCCCGCCCTTCAAGATCATCATCCT 4170081 Query 254228 GGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGAC 254287 |||||||| ||| ||||||| || || ||| ||| ||||||||||| |||||||| Sbjct 4170082 CGACGAGGCCGACTCCATGACCCAAGATGCCCAGAGCGCTCTCCGCCGAACAATGGAGAC 4170141 Query 254288 GCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCCCC 254347 || | | || || || ||||| | ||||||||||| | ||||||| ||| Sbjct 4170142 CTACAGCAAGATCACTCGGTTCTGCCTCATCTGCAACTACGTCACCCGAATCATCGACCC 4170201 Query 254348 GCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 || || ||| ||| |||||| || |||| Sbjct 4170202 TCTTGCCAGTCGATGCAGCAAGTTCCGCTTCA 4170233 >seq6 Length=5170228 Score = 89.7 bits (98), Expect = 1e-12 Identities = 205/305 (67%), Gaps = 19/305 (6%) Strand=Plus/Minus Query 254102 CGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAA 254161 ||| || |||||||| || |||||| | || | ||||||||||| || ||||| Sbjct 2482688 CGTCCTGGAGCTGAATGCCAGTGACGAGAGAGGCATCGACGTCGTCCGAAACCGCATCAA 2482629 Query 254162 GACTTTCTCCAAGATGTCGATTTCGTCGTTCCAACCCGGCTGTCCGCCTTTCAAGCTCGT 254221 | ||| | ||| | | ||| || |||||| | ||||| | |||||||| Sbjct 2482628 GGGCTTCGCGCAGAAGAAG-----GTCA--CCCTCCCGGCCGGCCGCCAT--AAGCTCGT 2482578 Query 254222 GATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGAT 254281 ||||| ||||| || |||| |||||| | | ||| ||| ||||||||||| ||||| Sbjct 2482577 CATCCTTGACGAAGCCGACAGCATGACCTCGGGCGCCCAGCAAGCCCTCCGCCGCACGAT 2482518 Query 254282 GGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCG---AAGAT 254338 ||||| ||||| |||||| || | | | |||||| | |||| ||||| Sbjct 2482517 GGAGATCTACTCCAACACGACGCGATTCGCCTTTGCCTGCAACCA---GTCGAACAAGAT 2482461 Query 254339 CATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCAGCACCCTC----GCGCCCA 254394 ||||| || ||| || || ||||||| | || | | || |||| |||||| Sbjct 2482460 CATCGAGCCTCTGCAGTCCCGCTGCGCCATCCTCCGCTACGGCCGCCTCACCGACGCCCA 2482401 Query 254395 AGTCG 254399 ||||| Sbjct 2482400 AGTCG 2482396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073766276181312