Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq6 123 2e-23 seq3 114 1e-20 seq5 102 6e-17 >seq6 Length=5170228 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| |||||| ||||||||| |||||||||||| | || |||| |||| || Sbjct 5051894 ACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTTAGGGTGCGACCGTCCTCG 5051835 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || ||||| || | ||||| || ||||| || | |||||||||||| Sbjct 5051834 AGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGG 5051775 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | ||| ||||||||| | ||| || |||||| Sbjct 5051774 ATCTTGGACTTGACGTTGTCAATGGTATCCGAGGACTCCACCTCAAGGGTGATGGTCTTG 5051715 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 || ||||||||||| || ||||| |||||| || Sbjct 5051714 CCAGTCAGAGTCTTGACGAAGATCTGCATGGTG 5051682 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| |||||| ||||||||| |||||||||||| | || |||| |||| || Sbjct 5110716 ACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTTAGGGTGCGACCGTCCTCG 5110775 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || ||||| || | ||||| || ||||| || | |||||||||||| Sbjct 5110776 AGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGG 5110835 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | ||| ||||||||| | ||| || |||||| Sbjct 5110836 ATCTTGGACTTGACGTTGTCAATGGTATCCGAGGACTCCACCTCAAGGGTGATGGTCTTG 5110895 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 || ||||||||||| || ||||| |||||| || Sbjct 5110896 CCAGTCAGAGTCTTGACGAAGATCTGCATGGTG 5110928 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || ||| ||||||||| || ||||||||| || ||| | || || Sbjct 5110431 ACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCA 5110490 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 ||||| || |||||||| |||| ||||| ||||||||||| | ||||||||||||| Sbjct 5110491 AGTTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 5110547 Score = 86.0 bits (94), Expect = 5e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| || ||||||||| || ||| | || || ||||| || |||||||| Sbjct 5052162 CTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAA 5052103 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 |||| ||||| ||||||||||| | ||||||||||||| Sbjct 5052102 AATCAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 5052063 >seq3 Length=5970797 Score = 114 bits (126), Expect = 1e-20 Identities = 152/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||| |||||||||||| || ||| |||| || || || Sbjct 630932 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTG 630991 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| |||| ||||| |||||||| || | |||||||||||| || || Sbjct 630992 CTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTT 631051 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| ||||||||| | ||| || ||||| ||||| Sbjct 631052 GGACTTGACATTGTCGATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTACCCGT 631111 Query 45313 CAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343 || ||||| || ||||| |||||| ||||| Sbjct 631112 GAGGGTCTTGACGAAGATCTGCATGGTGCCT 631142 >seq5 Length=5645814 Score = 102 bits (112), Expect = 6e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206 ||||||| |||||||||||| || ||| | || || || || || |||||||| | Sbjct 3291299 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 3291358 Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266 ||| ||||| |||||||| || | |||||||||||| || || ||| || Sbjct 3291359 TCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 3291418 Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326 | | | ||||| | ||||||||| | ||| || ||||||||||| || |||||||| | Sbjct 3291419 CAATGGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTAAGGGTCTTCACGA 3291478 Query 45327 A 45327 | Sbjct 3291479 A 3291479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395075156665189