Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq4 363 1e-95 seq5 176 4e-39 seq6 105 6e-18 seq3 96.9 3e-15 >seq4 Length=5903436 Score = 363 bits (402), Expect = 1e-95 Identities = 1220/1887 (65%), Gaps = 36/1887 (2%) Strand=Plus/Minus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 || ||| ||||| ||||| |||| ||||||| | ||| || || || ||||| || Sbjct 5784638 CTGGTCAACTGTGAACTGGATGGGAGCGGCGGCCGCCTGGGTACGCAGGTAGTACATTCC 5784579 Query 22165 CGTCTTCAGACCCATCTTCCA---CGCGTAAAAATGTATCGACGTCAATTTTCCATAACT 22221 |||||| ||||| | |||||| |||| || || || || | || || | Sbjct 5784578 CGTCTTGAGACCGAGCTTCCAGCCCGCG---AAGTGCATGCTGGTGATCTTGCCCATGGT 5784522 Query 22222 CGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGC 22281 || | ||| | | || | |||||| ||| ||||| || || || || || || Sbjct 5784521 GGGGTCCTTCATATGGATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCGCGGTCAGC 5784462 Query 22282 GGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGAT 22341 |||||| | | | | |||| || || ||||| |||||||||||||| | ||| Sbjct 5784461 GGCCATCTGAACGACAGCACGCTGGGAAATCTCCCAGACGGTCTTGTACAGGGCCTTGAC 5784402 Query 22342 CTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTT 22401 || || || ||| |||| ||||| ||||| | | ||||| || || Sbjct 5784401 TTCGGCTGGGATGTTAGGGATGTTCTGAACGGAGCCGTTCTCGGCGATGATACGGTTCTT 5784342 Query 22402 AATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCAC 22461 || | ||| ||| | ||| ||| || | || |||| ||| |||| || || Sbjct 5784341 CATGGCATCAGACCAGAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAAC 5784282 Query 22462 TTGAAACTCGCCGGACAAG-ACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAG 22520 || || ||||| | |||| |||||||| ||||| ||||| || ||| | || ||||| Sbjct 5784281 CTGGAATTCGCCAG-CAAGCACGCGGCGCTGGTAGATGTTCGAGGTGTAAGGCTCGAAGC 5784223 Query 22521 ATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCG 22580 |||| ||||| || || ||||||| || ||||| || ||||| || || | || | Sbjct 5784222 ATTCGTTGTTGCCAAGGATCTGAGATGTGGAAGCAGTGGGCATGGGGGCAACGAGCAAGC 5784163 Query 22581 AGTTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATC 22638 ||| | | ||||||| |||| | | || ||| || ||| ||||| || || Sbjct 5784162 TGTTGCGGACTCCGTGCTGCTTGATCTGCTCCTTCAGAGAGTC--CCAATCCCAGAGGTC 5784105 Query 22639 GGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCC 22698 | ||| | |||| ||||||||||||| || | | || | | ||| ||| Sbjct 5784104 AGTGGGCTTGACAT---CCCACATATCGTACTGGAGGATTCCCTGGGAGACAGGGGAGCC 5784048 Query 22699 TTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCC 22758 |||||||| ||| | || | | ||||| | |||| | || || | Sbjct 5784047 CTCGTACGTGGAGTAGGTGCCCTGCTCCTGAGCAAGCTTGCAGGACATGGTCAGGGCAGC 5783988 Query 22759 GTAATATATAGTCTCGAAGATTTTCTTGTTCAATTC---GGCGGCGGCGACGCTTTCGTA 22815 || || || ||||| ||||| | |||||| | || ||| ||| || || || | Sbjct 5783987 GTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCACGGGCCTCGG-GAGACT--CGAA 5783931 Query 22816 CGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCG 22875 ||||| || | | ||| ||||| |||| ||||||||| || | |||||| || || Sbjct 5783930 AGGCATGCGGAGGGCGAGGAAGGCGTCGGCCAGACCCTGAACACCCAGACCGATGGGACG 5783871 Query 22876 GTTTTTCAGATTCGACACTTTTGC----CTCGGGCAAAGGATACCAATTCGAATCGATTG 22931 | || || || |||| ||| | | || || | || ||||| Sbjct 5783870 ATGGCGCATGTTG----CTGTTGCGGGCCTCCTGAACGGGGTAGTAGTTGACGTCGATGA 5783815 Query 22932 TTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAA 22991 | |||||| ||| || || | | || | | |||||||| | Sbjct 5783814 TCTTGTTCAGGTTCCTCACAACGACCTGTGTGACCTCGTGCAGCTTCTTGAAGTCGTAGA 5783755 Query 22992 CGCCCGA-TTGTA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCA 23048 | ||| ||||| | || || | || || | |||||||| ||||| || || | Sbjct 5783754 CACCCTCGTTGTAGTCCACGAAAGAGGGGAGCGCCAAGGAGGCAAGGTTGCAGACAGCGA 5783695 Query 23049 CCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGC 23108 |||| || || |||||| | || || || || || ||| | || |||| Sbjct 5783694 CCTCATCAGGGGCACAGTACTCGATGATCTCCGTGCACAGGTTGGAGCTGCGGATGGTGC 5783635 Query 23109 CCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGC 23168 | | || |||||||||| || | ||| |||||||| |||||| | || ||| Sbjct 5783634 CGAGGTTCTTCTGGTTGCTCTTCCTGTTGGCGTGGTCCTTGTAAAGCATGAAGGGGTTGC 5783575 Query 23169 CCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCG-TGAACACGTCGC 23227 | |||||| ||| | ||||| ||| || ||| | |||| || ||| ||| Sbjct 5783574 CAGTCTCGGTCTGGGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCCTGATG--GTCTT 5783517 Query 23228 ACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACA 23286 || ||| ||| | | ||||||||||| ||||| || || || ||| | || || || Sbjct 5783516 CCGACCCTTGCCCGCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCGTCGCCATAGCA 5783457 Query 23287 GTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAAC 23346 |||||| || || || | | | || ||||| ||| |||| || || || || Sbjct 5783456 GTCGGCGAGACCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCGAC 5783397 Query 23347 GCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTC 23406 || |||| || ||||| || ||||| || ||| ||| || ||||| || || ||||| Sbjct 5783396 ACGCTTCATGAAGAGATCGGGGATCCAGAGGGCGAGGAATAGATCGCGAGCACGGACCTC 5783337 Query 23407 CTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTC 23466 ||| |||||| |||||| || |||| || || || || || || ||||||||||| Sbjct 5783336 CTCCTTGCCGTGGTTCTTGCGCAGGTCCAGGAACTCGAAGACATCAGCGTGCCACGGCTC 5783277 Query 23467 GAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGT 23526 ||||| | ||| || ||||| || | ||| ||||| ||||| ||||| || ||||| || Sbjct 5783276 AAGGTAGATGGCGAAAGCGCCGGGGCGCTTGTTGCCACCCTGGTCGACATAGCGGGCGGT 5783217 Query 23527 GTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCAC 23586 ||||||| |||| | ||||| || | || ||||||||| | |||| ||| || | Sbjct 5783216 GTTGTTGAACACACGCAGCATGGGGATGATACCGTTGGAGGTGCCGTTGGTGCCGGCAAT 5783157 Query 23587 ACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGA 23646 ||||| | || || | | ||| |||| | || ||||| || || || || Sbjct 5783156 GTAAGAACCAGTGGCACGGATGCGGTGGACGTTCAGGCCAATGCCGCCAGCCATCTTGGA 5783097 Query 23647 TATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGC 23706 ||||| || || || || ||||||||||||||||||||||||||||| || | | Sbjct 5783096 AATCATGGCACAGGTCTTGAGGGTGTCGTAGATGCCCTCGATGCTGTCCTCCTTCATGTC 5783037 Query 23707 GACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCT 23766 ||| | ||| || ||||||| ||| || | ||| || | || ||| || || || Sbjct 5783036 GACGAGGAAGCAGGAAGACAGTTGAGCCTGGGGGGTGCCCGCATTGAATAGGGTGGGCGA 5782977 Query 23767 GGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTC 23826 ||| || || ||| || | ||||| || ||||| || |||||| || || | || Sbjct 5782976 GGCATGAGTGAAGAATTTGCTGGACATCAGGTTGTAGGTCTCGATGACGCGCTCGACATC 5782917 Query 23827 CTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGAC 23886 || || || |||| ||| || ||||| ||||||| ||||| | ||| | | Sbjct 5782916 ATCACCCCAGATGCCGACGGCAACCCGCATAATCATGTGCTGAGGGCGCTCTGCGATCTT 5782857 Query 23887 GCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTT 23946 ||| | | |||| ||| || || || | || || || || || || || | ||||| Sbjct 5782856 GCCATCCAACTTGAGCAGGTAAGATCGCTCCAGGGTCTTGAAGCCGAAGTACTGGTAGTT 5782797 Query 23947 AAAGTCACGATCGTGCACTATGGCCGA 23973 |||||||| || | || ||||| || Sbjct 5782796 GAAGTCACGGTCATAGACGATGGCGGA 5782770 >seq5 Length=5645814 Score = 176 bits (194), Expect = 4e-39 Identities = 295/421 (70%), Gaps = 12/421 (3%) Strand=Plus/Minus Query 57979 TCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGA 58038 |||| ||||| ||||| || ||||| ||||| || ||||||| | || || ||| Sbjct 2728344 TCGCTTTCGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCGTCCATCTTCTGGC 2728285 Query 58039 TGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACG 58098 | ||||| ||||||||||||||||||||||| ||| ||||||| | || ||||| |||| Sbjct 2728284 TCAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTTTCCAACGAGCTCATCTCGCGTGACG 2728225 Query 58099 AGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGC 58158 |||||||||| ||||| || || ||||| | | ||| ||| |||| || | || Sbjct 2728224 AGGGTCTCCACACTGACTTCGCCTGCCTGCTCTTCTCCCAC---CTCAACAAGCGCCCGA 2728168 Query 58159 GGGATC---GCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCA 58215 | | | ||| |||||| ||| ||| || ||| ||||| | ||||| ||| Sbjct 2728167 GCAAACAGATGATCCAGGACATCATCGTCGATGCTGTCAAAATCGAGCAGGAGTTCCTCA 2728108 Query 58216 CCGAAGCCCT-ACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATT 58274 ||||||| || || | || | ||||||| |||||| | | | ||| |||||||| Sbjct 2728107 CCGAAGCTCTCCCCTGCGGTC-TGCTCGGCATGAACTCTACTCTCATGAAGCAGTACATT 2728049 Query 58275 GAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGA 58332 ||||||||||||||| | || | ||| || | |||| ||| ||||| | Sbjct 2728048 GAGTTTGTTGCCGACCGTCTCCTCGTCGCCCTCGGCAACGAGAAGGTC--TACAAGGTCA 2727991 Query 58333 AAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAA 58392 || || || || || ||| | ||||| |||| |||||||| ||||| ||||| | Sbjct 2727990 CCAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACTTCTTCGAGA 2727931 Query 58393 A 58393 | Sbjct 2727930 A 2727930 >seq6 Length=5170228 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||||||||| ||||| || |||||| | || || || | || Sbjct 5051685 CATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTGGAGTCCTC 5051744 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | || | ||||| | || ||||||||| ||| | || ||||| || Sbjct 5051745 GGATACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGATCA 5051804 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || |||||||| || ||| | || ||| | || | ||||| || || Sbjct 5051805 GCAGCGTCTCATTTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTAAGCGACTACAA 5051864 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || || || || ||||| || Sbjct 5051865 CATCCAGAAGGAGTCCACGCTCCACCTGGTTCT 5051897 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||||||||| ||||| || |||||| | || || || | || Sbjct 5110925 CATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTGGAGTCCTC 5110866 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | || | ||||| | || ||||||||| ||| | || ||||| || Sbjct 5110865 GGATACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGATCA 5110806 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || |||||||| || ||| | || ||| | || | ||||| || || Sbjct 5110805 GCAGCGTCTCATTTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTAAGCGACTACAA 5110746 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || || || || ||||| || Sbjct 5110745 CATCCAGAAGGAGTCCACGCTCCACCTGGTTCT 5110713 Score = 102 bits (112), Expect = 7e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || || ||||| || || ||| | || || ||| ||||| Sbjct 5110183 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACTATTACCCTGGAAGTCGAATCGTCC 5110124 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || || ||| ||||| || | || || |||||| Sbjct 5110123 GACACGATCGATAACGTGAAGTCGAAGATCCAGGATAAGGAGGGTATTCCTCCTGACCAG 5110064 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 ||||| || || |||||||| || ||| ||||||| | | | || || ||||| || Sbjct 5110063 CAGCGCCTGATCTTCGCTGGAAAGCAGCTGGAAGA-TGGACGTACCCTGTCGGATTACAA 5110005 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || |||||||| ||||| || || Sbjct 5110004 CATCCAGAAGGAGTCGACTCTGCATCTCGTCCT 5109972 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/233 (70%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| ||||| || || || || || ||||| | || || || | || Sbjct 5110412 CATGCAGATTTTCGTCAAGACCCTCACCGGAAAGACCATCACTCTGGAAGTCGAGTCTTC 5110353 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGA 31308 |||| |||| | || || ||| || | | ||||||||| ||| | || ||||| Sbjct 5110352 TGACACAATCGACAACGTGAA---GAGCAAGATCCAGGACAAGGAGGGCATCCCTCCCGA 5110296 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||||||||| || || || || ||||| ||||||||||| || || || || Sbjct 5110295 CCAGCAGCGCCTCATCTTTGCGGGCAAGCAGTTGGAAGATGGCCGCACCCTGTCTGACTA 5110236 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || || || || ||||| || ||| | ||| | || |||| Sbjct 5110235 CAACATCCAGAAGGAGTCTACCCTGCATCTCGTCCTTCGTCTGCGTGGTGGTA 5110183 >seq3 Length=5970797 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || || || || |||||| | || || || |||| Sbjct 631136 CATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCGTC 631077 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | ||||| | || ||||||||| ||| | || |||||||| Sbjct 631076 CGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCA 631017 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||| ||||| ||| | || ||| || | ||| || || Sbjct 631016 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTACAA 630957 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || || ||||| || || || Sbjct 630956 CATCCAGAAGGAGTCCACCCTTCACCTCGTGCT 630924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766349851280