Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq4 172 8e-38 seq5 93.3 6e-14 >seq4 Length=5903436 Score = 172 bits (190), Expect = 8e-38 Identities = 474/726 (65%), Gaps = 8/726 (1%) Strand=Plus/Minus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 ||||||||||| || | ||| | | ||||| || |||| || ||||||| | | Sbjct 5783476 TCGAACTCGTCGCCATAGCAGTCGGCGAGACCAGGGCACTCGTTGGGGCACATCAGAGTC 5783417 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 || || || | | || || || ||||| |||||||| || ||||| || || | ||| Sbjct 5783416 CAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGGATCCAGAGGGCGAGGAAT 5783357 Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040 ||||| | | | |||||| || || ||||| || || |||||| | | Sbjct 5783356 AGATCGCGAGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCCAGGAACTCGAAG 5783297 Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100 | ||||| |||||||| || | ||| ||||| | | | || || || ||||| || ||| Sbjct 5783296 ACATCAGCGTGCCACGGCTCAAGGTAGATGGCGAAAGCGCCGGGGCGCTTGTTGCCACCC 5783237 Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160 || || | || | |||||||| || | || | || ||| || || ||||| ||||| Sbjct 5783236 TGGTCGACATAGCGGGCGGTGTTGTTGAACACACGCAGCATGGGGATGATACCGTTGGAG 5783177 Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 80220 || || ||||| |||| || || ||| ||||||| || | || || Sbjct 5783176 GTGCCGTTGGTGCCGGCAATGTAAGAACCAGTGGCACGGATGCGGTGGACGTTCAGGCCA 5783117 Query 80221 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 80280 || || || ||||| || || || | || || || | || || ||||||||||| Sbjct 5783116 ATGCCGCCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTGTCGTAGATGCCCTCG 5783057 Query 80281 ATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 80340 ||||| || || |||||| | || || ||| ||||| ||| | || ||| Sbjct 5783056 ATGCTGTCCTCCTTCATGTCGACGAGGAAGCAGGAAGACAGTTGAGCCTGGGGGGTGCCC 5782997 Query 80341 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTC 80400 ||||| |||| ||| || || || || || || |||| |||| || ||||| ||| Sbjct 5782996 GCATTGAATAGGGTGGGCGAGGCATGAGTGAAGAATTTGCTGGACATCAGGTTGTAGGTC 5782937 Query 80401 TCAATAGCTGATTCTATATC----CCATTGATGAATTCCTACCGCGACACGCATTAACAT 80456 || || | || | ||| || |||| || || || || ||||| | ||| Sbjct 5782936 TCGATGACGCGCTCGACATCATCACCCCAGATG----CCGACGGCAACCCGCATAATCAT 5782881 Query 80457 GTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGT 80516 ||||||||| | || |||||||| || | || | || ||||||| |||| || Sbjct 5782880 GTGCTGAGGGCGCTCTGCGATCTTGCCATCCAACTTGAGCAGGTAAGATCGCTCCAGGGT 5782821 Query 80517 TTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTT 80576 || || || || || | ||| ||||| || || || | || | |||| ||||| Sbjct 5782820 CTTGAAGCCGAAGTACTGGTAGTTGAAGTCACGGTCATAGACGATGGCGGAGTCGAGTTC 5782761 Query 80577 ATCCTT 80582 ||||| Sbjct 5782760 CTCCTT 5782755 Score = 86.0 bits (94), Expect = 9e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 78706 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 78765 |||| ||| | |||||| || |||||||||| || | | ||||| || ||||||||| Sbjct 5784640 TCCTGGTCAACTGTGAACTGGATGGGAGCGGCGGCCGCCTGGGTACGCAGGTAGTACATT 5784581 Query 78766 CCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTC 78825 ||||| || |||||||| |||| || ||| ||||| || || | ||| | Sbjct 5784580 CCCGTCTTGAGACCGAGCTTCCAGCCCGCGAAGTGCATGCTGGTGATCTTGCCCATGGTG 5784521 Query 78826 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 78885 || || |||||||| |||| || || || ||||||||||| || | ||| || Sbjct 5784520 GGGTCCTTCATATGGATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCGCGGTCAGCG 5784461 Query 78886 GCCAT 78890 ||||| Sbjct 5784460 GCCAT 5784456 >seq5 Length=5645814 Score = 93.3 bits (102), Expect = 6e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| || ||| ||||||||||| | || || ||||||||||| || || Sbjct 2728200 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAAAAGGTCAGG 2728259 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| ||||| ||||| || ||||| || ||||||||||| | || |||||| Sbjct 2728260 CCGGGCATCAGGCCGCGCTTCTTGAGCCAGAAGATGGACGCAAAGGCACCGCTGAAGAAG 2728319 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAG 50108 || || || || || || || || || || Sbjct 2728320 ATACCCTCAACGGCAGCGAAAGCGACCAG 2728348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268719194760