Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq4 152 7e-32 >seq4 Length=5903436 Score = 152 bits (168), Expect = 7e-32 Identities = 472/727 (65%), Gaps = 10/727 (1%) Strand=Plus/Minus Query 71944 TCGAACTCGTCTCCCCAAGCATT-GTCTAATCCAGGACATTCATTCGGACACATCAATGA 72002 ||||||||||| || | ||| | | | | ||||| || || || || ||||||| | Sbjct 5783476 TCGAACTCGTCGCCATA-GCAGTCGGCGAGACCAGGGCACTCGTTGGGGCACATCAGAGT 5783418 Query 72003 CCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 72062 ||| || || | | | || || ||||| |||||||| || ||||| || || | || Sbjct 5783417 CCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGGATCCAGAGGGCGAGGAA 5783358 Query 72063 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 72122 |||||| | | | |||||| || || ||||| || || |||||| | | Sbjct 5783357 TAGATCGCGAGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCCAGGAACTCGAA 5783298 Query 72123 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCC 72182 | ||||| |||||||| || | ||| ||||| | | | || || || ||||| || || Sbjct 5783297 GACATCAGCGTGCCACGGCTCAAGGTAGATGGCGAAAGCGCCGGGGCGCTTGTTGCCACC 5783238 Query 72183 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 72242 ||| || | || | |||||||| || | || | || ||| || || ||||| ||||| Sbjct 5783237 CTGGTCGACATAGCGGGCGGTGTTGTTGAACACACGCAGCATGGGGATGATACCGTTGGA 5783178 Query 72243 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACC 72302 | || ||||| |||| || || ||| ||||||| || | | || || Sbjct 5783177 GGTGCCGTTGGTGCCGGCAATGTAAGAACCAGTGGCACGGATGCGGTGGACGTTCAGGCC 5783118 Query 72303 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 72362 || || || ||||| || || || | || || || | || || ||||||||||| Sbjct 5783117 AATGCCGCCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTGTCGTAGATGCCCTC 5783058 Query 72363 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 72422 || || || ||| |||||| | || || ||| ||||| ||| | || || Sbjct 5783057 GATGCTGTCCTCCTTCATGTCGACGAGGAAGCAGGAAGACAGTTGAGCCTGGGGGGTGCC 5782998 Query 72423 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGT 72482 |||||| |||| ||| || || || || || || |||| |||| || ||||| || Sbjct 5782997 CGCATTGAATAGGGTGGGCGAGGCATGAGTGAAGAATTTGCTGGACATCAGGTTGTAGGT 5782938 Query 72483 CTCAATAGCTGATTCTATATC----CCATTGATGTATTCCTACCGCGACACGCATTAACA 72538 ||| || | || | ||| || |||| || || || || ||||| | || Sbjct 5782937 CTCGATGACGCGCTCGACATCATCACCCCAGATG----CCGACGGCAACCCGCATAATCA 5782882 Query 72539 TATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAG 72598 | |||||||| | || |||||||| || | || | || ||| ||| |||| | Sbjct 5782881 TGTGCTGAGGGCGCTCTGCGATCTTGCCATCCAACTTGAGCAGGTAAGATCGCTCCAGGG 5782822 Query 72599 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTT 72658 | || || || || || | ||| ||||| || || || | || | || | ||||| Sbjct 5782821 TCTTGAAGCCGAAGTACTGGTAGTTGAAGTCACGGTCATAGACGATGGCGGAGTCGAGTT 5782762 Query 72659 TATCCTT 72665 ||||| Sbjct 5782761 CCTCCTT 5782755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139124496840