Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01]
9 sequences; 40,320,693 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq4 152 7e-32
>seq4
Length=5903436
Score = 152 bits (168), Expect = 7e-32
Identities = 472/727 (65%), Gaps = 10/727 (1%)
Strand=Plus/Minus
Query 71944 TCGAACTCGTCTCCCCAAGCATT-GTCTAATCCAGGACATTCATTCGGACACATCAATGA 72002
||||||||||| || | ||| | | | | ||||| || || || || ||||||| |
Sbjct 5783476 TCGAACTCGTCGCCATA-GCAGTCGGCGAGACCAGGGCACTCGTTGGGGCACATCAGAGT 5783418
Query 72003 CCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 72062
||| || || | | | || || ||||| |||||||| || ||||| || || | ||
Sbjct 5783417 CCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGGATCCAGAGGGCGAGGAA 5783358
Query 72063 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 72122
|||||| | | | |||||| || || ||||| || || |||||| | |
Sbjct 5783357 TAGATCGCGAGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCCAGGAACTCGAA 5783298
Query 72123 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCC 72182
| ||||| |||||||| || | ||| ||||| | | | || || || ||||| || ||
Sbjct 5783297 GACATCAGCGTGCCACGGCTCAAGGTAGATGGCGAAAGCGCCGGGGCGCTTGTTGCCACC 5783238
Query 72183 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 72242
||| || | || | |||||||| || | || | || ||| || || ||||| |||||
Sbjct 5783237 CTGGTCGACATAGCGGGCGGTGTTGTTGAACACACGCAGCATGGGGATGATACCGTTGGA 5783178
Query 72243 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACC 72302
| || ||||| |||| || || ||| ||||||| || | | || ||
Sbjct 5783177 GGTGCCGTTGGTGCCGGCAATGTAAGAACCAGTGGCACGGATGCGGTGGACGTTCAGGCC 5783118
Query 72303 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 72362
|| || || ||||| || || || | || || || | || || |||||||||||
Sbjct 5783117 AATGCCGCCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTGTCGTAGATGCCCTC 5783058
Query 72363 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 72422
|| || || ||| |||||| | || || ||| ||||| ||| | || ||
Sbjct 5783057 GATGCTGTCCTCCTTCATGTCGACGAGGAAGCAGGAAGACAGTTGAGCCTGGGGGGTGCC 5782998
Query 72423 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGT 72482
|||||| |||| ||| || || || || || || |||| |||| || ||||| ||
Sbjct 5782997 CGCATTGAATAGGGTGGGCGAGGCATGAGTGAAGAATTTGCTGGACATCAGGTTGTAGGT 5782938
Query 72483 CTCAATAGCTGATTCTATATC----CCATTGATGTATTCCTACCGCGACACGCATTAACA 72538
||| || | || | ||| || |||| || || || || ||||| | ||
Sbjct 5782937 CTCGATGACGCGCTCGACATCATCACCCCAGATG----CCGACGGCAACCCGCATAATCA 5782882
Query 72539 TATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAG 72598
| |||||||| | || |||||||| || | || | || ||| ||| |||| |
Sbjct 5782881 TGTGCTGAGGGCGCTCTGCGATCTTGCCATCCAACTTGAGCAGGTAAGATCGCTCCAGGG 5782822
Query 72599 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTT 72658
| || || || || || | ||| ||||| || || || | || | || | |||||
Sbjct 5782821 TCTTGAAGCCGAAGTACTGGTAGTTGAAGTCACGGTCATAGACGATGGCGGAGTCGAGTT 5782762
Query 72659 TATCCTT 72665
|||||
Sbjct 5782761 CCTCCTT 5782755
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671139124496840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |