Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01]
9 sequences; 40,320,693 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq5 159 5e-34
seq4 141 1e-28
>seq5
Length=5645814
Score = 159 bits (176), Expect = 5e-34
Identities = 343/502 (68%), Gaps = 23/502 (5%)
Strand=Plus/Minus
Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420
|| || || ||||| | |||| ||||| |||||| ||| | ||||| | | |||
Sbjct 2728414 ATCCGCAAGAAGGCCGATTGGGCTATTCGCTGGATCACCGACAAGGAGTCTACCTTCGCG 2728355
Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480
| ||||| || ||||| ||||| ||||| |||||||| ||| |||||| ||
Sbjct 2728354 TCGCGTCTGGTCGCTTTCGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCGTCC 2728295
Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540
||||| ||||||||||||||||| || |||||||| ||||| |||||| | ||
Sbjct 2728294 ATCTTCTGGCTCAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTTTCCAACGAGCTCATC 2728235
Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTG 125597
|| || |||||||| || ||| |||||| ||| || || || || || || | |
Sbjct 2728234 TCGCGTGACGAGGGTCTCCACACTGACTTCGCCTGCCTGCTCTTCTCCCACCTCAACAAG 2728175
Query 125598 CGTCCCGAGTGCAGATCCAGCGATGA-AAAGGTCATCAACATTGTAACCGATGCCGTGAG 125656
|| ||||| ||| | || ||||| ||| ||||| | | |||||| || |
Sbjct 2728174 CG-CCCGA--GCAAA--CA--GATGATCCAGGACATCATCGT------CGATGCTGTCAA 2728128
Query 125657 GATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAA 125716
|| || || ||||| || |||||| | || || | | || | |||||||||| |
Sbjct 2728127 AATCGAGCAGGAGTTCCTCACCGAAGCTCTCCCCTGCGGTCTGCTCGGCATGAACTCTAC 2728068
Query 125717 GCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC-- 125774
|| ||| ||||||| |||||||| || || ||||| || || | |||
Sbjct 2728067 TCTCATGAAGCAGTACATTGAGTTTGTTGCCGACCGTCTCCT---CGTCGCCCTCGGCAA 2728011
Query 125775 CG-CAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGG 125833
|| ||| | ||||| | || || ||||| || |||||| | ||| || || | ||
Sbjct 2728010 CGAGAAGGTCTACAAGGTCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGG 2727951
Query 125834 TAAGACCAACTTTTTCGAGAAG 125855
||||||||||| |||||||||
Sbjct 2727950 CAAGACCAACTTCTTCGAGAAG 2727929
Score = 127 bits (140), Expect = 3e-24
Identities = 207/290 (71%), Gaps = 6/290 (2%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| |||||||||| ||||| | ||| ||| |||| |||
Sbjct 2728814 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACTGCCGAGGAGATCGACCTG 2728755
Query 125079 TCCAAGGACCTGTACGATTGGGA-GACTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137
|||||||| || |||||||| | || | | || || |||| | | || || ||
Sbjct 2728754 TCCAAGGATCTCCACGATTGGAACAACAAGATCAAC-GATGATGAGAAATACTTCATCTC 2728696
Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACAC 125196
||||| |||| ||||| |||| |||||| || || |||||||| || || || || |
Sbjct 2728695 TCACATCCTGGCTTTCTTCGCCGCCTCCGACGGCATTGTCAACGAGAACCTCGTCGA-GC 2728637
Query 125197 GATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATG 125255
| || ||| | ||||| |||| ||| ||||| ||||| ||||| ||||||
Sbjct 2728636 GTTTTAGCGGCGAGGTCCAGATTCCCGAGG-CTCGCTGCTTCTACGGCTTCCAGATCATG 2728578
Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305
|| |||||| | ||||| || | ||||| || ||||| | |||||
Sbjct 2728577 ATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATTGATACCTACAT 2728528
>seq4
Length=5903436
Score = 141 bits (156), Expect = 1e-28
Identities = 302/446 (68%), Gaps = 4/446 (1%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| ||||| || || || |||||| | ||| ||||| | || || |||||||| ||
Sbjct 5783235 CAGGGTGGCAACAAGCGCCCCGGCGCTTTCGCCATCTACCTTGAGCCGTGGCACGCTGAT 5783294
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| || || || | || ||||||| ||| ||| || |||| || || | ||
Sbjct 5783295 GTCTTCGAGTTCCTGGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCGTGCTCGCGAT 5783354
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055
| || || |||||| | || ||| | ||||||||||| ||| | | ||| ||
Sbjct 5783355 CTATTCCTCGCCCTCTGGATCCCCGATCTCTTCATGAAGCGTGTCGAGAAGAACGGCGAC 5783414
Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115
|||| || ||||||||| || || || ||||| |||| |||| ||||| |||||
Sbjct 5783415 TGGACTCTGATGTGCCCCAACGAGTGCCCTGGTCTCGCCGACTGCTATGGCGACGAGTTC 5783474
Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGC-CGATACGTGAGACGAGTCGATGCACG 97174
||||| |||| |||||| | | |||| | || |||| | || | | |
Sbjct 5783475 GAGGCTCTGTACGAAAAGTACGAGAAGGCGGGCAAGGGTCGGAAGACCA-TC-AGGGCCC 5783532
Query 97175 AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCT 97233
|||| || ||| | |||||| | ||| ||| |||||||| | || | ||| || |
Sbjct 5783533 AGAAGCTCTGGTATGCCATCCTCGAGGCCCAGACCGAGACTGGCAACCCCTTCATGCTTT 5783592
Query 97234 ACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCA 97293
||||||| || || | || |||||||| || | ||||||||| ||||||
Sbjct 5783593 ACAAGGACCACGCCAACAGGAAGAGCAACCAGAAGAACCTCGGCACCATCCGCAGCTCCA 5783652
Query 97294 ATCTGTGCACGGAAATTGTAGAGTAC 97319
| ||||||||||| || | ||||||
Sbjct 5783653 ACCTGTGCACGGAGATCATCGAGTAC 5783678
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741059116630840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |