Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2 116 6e-22 seq1 113 7e-21 >seq2 Length=7157451 Score = 116 bits (128), Expect = 6e-22 Identities = 88/101 (87%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||||||||||| ||| |||||| || |||||||| || ||||| ||||| ||||| Sbjct 4979620 GCCAAGCGTCATCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACGAAGCCCGCTAT 4979562 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||||||||| ||||||||||| || ||||||||| |||||| Sbjct 4979561 CCGTCGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCTG 4979521 Score = 84.2 bits (92), Expect = 3e-12 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| || | ||| | ||| ||||||| || || |||| ||| | Sbjct 4979456 TGATCTACGAGGAGACCCGCGGTGTCCTCAAGTCCTTCCTCGAGGGTGTCATCCGTGACG 4979397 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || ||| ||||||||||| || || ||||| |||||||| |||| | ||||| | Sbjct 4979396 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACCTCTCTGGACGTTGTCTACG 4979337 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | |||| || || ||||||| | || ||||| || ||||| Sbjct 4979336 CCCTGAAGCGCCAGGGCCGTACCCTGTACGGTTTCGGTGGTTAA 4979293 >seq1 Length=7510044 Score = 113 bits (124), Expect = 7e-21 Identities = 87/101 (86%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| ||||||| ||| ||| || || ||||| || || ||||||||||| ||||| Sbjct 708081 GCCAAGCGCCATCGCAAGAT-TCTCCGTGACAACATTCAGGGCATCACCAAGCCCGCTAT 708023 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||||||||| |||||||||||||| ||||||||| |||||| Sbjct 708022 CCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 707982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075191771237