Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01]
9 sequences; 40,320,693 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq4 123 2e-23
>seq4
Length=5903436
Score = 123 bits (136), Expect = 2e-23
Identities = 418/640 (65%), Gaps = 17/640 (3%)
Strand=Plus/Minus
Query 148250 CTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTTTAAACCGGGACA 148309
|||||| |||||||| || ||||||| || | ||||||||| ||| | ||| || ||
Sbjct 5783498 CTCGTACTTTTCGTACAGAGCCTCGAACTCGTCGCCATAGCAGTCGGCGAGACCAGGGCA 5783439
Query 148310 CTCGTCGGGGCACATCAATGACCATTTCCC-TCCTGTCTTTACCCTCTTCATAAACAGAT 148368
||||| ||||||||||| | ||| | || | || ||| || | |||||| || ||||
Sbjct 5783438 CTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCT-TCTCGACACGCTTCATGAAGAGAT 5783380
Query 148369 CAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATATCCTC---GGCACCCATAT 148425
| || |||| | ||| | | ||||||||||| | ||||| | | | |
Sbjct 5783379 CGGGGATCCAGAGGGCGAGGAATAGATCGCGAGCACGGACCTCCTCCTTGCCGTGGTTCT 5783320
Query 148426 TGCGCTTTAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTCGATGTATACGGTCA 148485
||||| || |||| || || || || |||||||| ||||| | ||| | || |
Sbjct 5783319 TGCGC---AGGTCCAGGAACTCGAAGACATCAGCGTGCCACGGCTCAAGGTAGATGGCGA 5783263
Query 148486 TGGCGCC---TTTCCTTTTACCTCCTTGATCGACATGGCGTAGCATGCTATTAAAAACAC 148542
||||| | | || || || || ||||||| ||| || | || || ||||
Sbjct 5783262 AAGCGCCGGGGCGCTTGTTGCCACCCTGGTCGACATAGCGGGCGGTGTTGTTGAACACAC 5783203
Query 148543 GCAATGCA-GGTCCCAATCCCGCCGCA-GTTCCGTTTGTGGATTCAATTTTACTATTGGT 148600
||| ||| || || ||| | | || ||||| ||| |||| | | | ||
Sbjct 5783202 GCA--GCATGGGGATGATACCGTTGGAGGTGCCGTTGGTGCCGGCAATGTAAGAACCAGT 5783145
Query 148601 GGCGCGAATTTGAGTGACATTCAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGCACA 148660
||| || || | ||| |||||||| |||||||| | || || |||||||||||
Sbjct 5783144 GGCACGGATGCGGTGGACGTTCAGGCCAATGCCGCCAGCCATCTTGGAAATCATGGCACA 5783085
Query 148661 ATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTGAATGTTAAGCAGGTAGCA 148720
||||| || | |||||||| | || |||||||| | |||| | ||| ||||
Sbjct 5783084 GGTCTTGAGGGTGTCGTAGATGCCCTCGATGCTGTCCTCCTTCATGTCGACGAGGAAGCA 5783025
Query 148721 CGATGACATTTGAGGCATTTTCATGCCAGACGAAAATAGAGTTGGACTAGCGTGAGTGAA 148780
|| |||| ||||| | |||| | ||||| || || || ||||||||
Sbjct 5783024 GGAAGACAGTTGAGCCTGGGGGGTGCCCGCATTGAATAGGGTGGGCGAGGCATGAGTGAA 5782965
Query 148781 CAGCTTTGCCCG-CATCAATCTATAGGATTCGATAGCGCTTTCGATGTCATCACCATGAA 148839
| ||||| | ||||| | |||| ||||| ||| |||| |||||||| |
Sbjct 5782964 GA-ATTTGCTGGACATCAGGTTGTAGGTCTCGATGACGCGCTCGACATCATCACCCCAGA 5782906
Query 148840 TCTGTAGAGCTACACGCATCAGCATGTGTTGAGGCCTCTC 148879
| | || || ||||| | |||||| ||||| | |||
Sbjct 5782905 TGCCGACGGCAACCCGCATAATCATGTGCTGAGGGCGCTC 5782866
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478662346150480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |