Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4 381 2e-100 >seq4 Length=5903436 Score = 381 bits (422), Expect = 2e-100 Identities = 1071/1627 (66%), Gaps = 28/1627 (2%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| || ||| |||| || | | |||||| || || | | | || ||||||| Sbjct 5782965 TTCACTCATGCCTCGCCCACCCTATTCAATGCGGGCACCCCCCAGGCTCAACTGTCTTCC 5783024 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | |||||||| || ||||||||| |||| ||||| || |||| Sbjct 5783025 TGCTTCCTCGTCGACATGAAGGAGGACAGCATCGAGGGCATCTACGACACCCTCAAGACC 5783084 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725 ||||| | |||||||||| || ||||| ||||| | | || ||||| | ||||| Sbjct 5783085 TGTGCCATGATTTCCAAGATGGCTGGCGGCATTGGCCTGAACG-TCCACCGCATCCGTGC 5783143 Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784 || | ||||||| |||||| || ||| || || | | |||||||| | Sbjct 5783144 CACTGGTTC-TTACATTGCCGGCACCAACGGCACCTCCAACGGTATCATCCCCATGCTGC 5783202 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844 ||||||| |||| || || | || |||||||||||||| |||||| || || | Sbjct 5783203 GTGTGTTCAACAACACCGCCCGCTATGTCGACCAGGGTGGCAACAAGCGCCCCGGCGCTT 5783262 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904 | || || || || ||||| || || ||| | || ||||| || || || || || | Sbjct 5783263 TCGCCATCTACCTTGAGCCGTGGCACGCTGATGTCTTCGAGTTCCTGGACCTGCGCAAGA 5783322 Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 || || || ||||| | ||||| || ||||| ||| || || ||| | | || | Sbjct 5783323 ACCACGGCAAGGAGGAGGTCCGTGCTCGCGATCTATTCCTCGCCCTCTGGATCCCCGATC 5783382 Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATG 364022 || |||||||| || ||| | | | | | ||| | || | ||||| |||| || Sbjct 5783383 TCTTCATGAAGCGTGTCGAG--AAGAACGGCGACTGGACTCTGATGTGCCCCAACGAGTG 5783440 Query 364023 TCCAGGTCTTTCCGA-TG-TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAA 364080 || ||||| |||| || ||||| | |||| | | ||||| ||||||||||| || Sbjct 5783441 CCCTGGTCTCGCCGACTGCTATGGCG--ACGAGTTCGAGGCTCTGTACGAAAAGTACGAG 5783498 Query 364081 TCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGAT 364140 || ||| |||| ||| ||||| || || |||||||| |||| ||||||| | || Sbjct 5783499 AAGGCGGGCAAGGGTCGGAAGACCATCAGGGCCCAGAAGCTCTGGTATGCCATCCTCGAG 5783558 Query 364141 TCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCC 364200 | |||| ||||| || | |||| ||| | ||||| || |||| | ||| | Sbjct 5783559 GCCCAGACCGAGACTGGCAACCCCTTCATGCTTTACAAGGACCACGCCAACAGGAAGAGC 5783618 Query 364201 AACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATA 364259 |||||| || |||| || || | || |||| |||||| || || ||||| || || || Sbjct 5783619 AACCAGAAGAACCTCGGCACCA-TCCGCAGCTCCAACCTGTGCACGGAGATCATCGAGTA 5783677 Query 364260 CACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 | || || || ||| || || || |||||||| || | ||||| || | || || Sbjct 5783678 CTGTGCCCCTGATGAGGTCGCTGTCTGCAACCTTGCCTCCTTGGCGCTCCCCTCTTTCGT 5783737 Query 364320 ------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTAC 364373 || || ||| | ||| | || | || | || || || | | | Sbjct 5783738 GGACTACAACGAGGGTGTCTACGACTTCAAGAAGCTGCACGAGGTCACACAGGTCGTTGT 5783797 Query 364374 TTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTC 364433 | || || ||||| | |||||| || || || || ||| || ||| Sbjct 5783798 GAGGAACCTGAACAAGATCATCGACGTCAACTACTACCCCGTTCAGGAGGCCCGCAACAG 5783857 Query 364434 TAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGAT 364493 || ||||| ||||| || || ||||| ||||| ||||| || || |||| || | Sbjct 5783858 CAACATGCGCCATCGTCCCATCGGTCTGGGTGTTCAGGGTCTGGCCGACGCCTTCCTCGC 5783917 Query 364494 GCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAAC 364553 ||| ||| | || || || || || || |||| || || ||| |||||||||| || Sbjct 5783918 CCTCCGCATGCCTTTCGAGTCTCCCGAGGCCCGTGAGCTCAACAAGCAGATCTTTGAGAC 5783977 Query 364554 AATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTC 364613 || || || || |||| || || | | || | |||| | ||||| Sbjct 5783978 CATCTACCACGCTGCCCTGACCATGTCCTGCAAGCTTGCTCAGGAGCAGGGCACCTACTC 5784037 Query 364614 TACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCAC 364673 || || ||||| |||||| | || ||||||| |||||| ||| | ||| |||||| Sbjct 5784038 CACGTACGAGGGCTCCCCTGTCTCCCAGGGAATCCTCCAGTACGATATGTGGGATGTCAA 5784097 Query 364674 GCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTC 364732 ||| ||| || ||| | ||||| | || | | | | | ||| |||| || | Sbjct 5784098 GCCCACTGACCTCTGGGATTGGGACTCTCTGAAGGAGC-AGATCAAGCAGCACGGAGTCC 5784156 Query 364733 GCAA---CTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAA 364789 |||| || |||||| || ||||||||||| ||||| || | |||||||| || | Sbjct 5784157 GCAACAGCTTGCTCGTT---GCCCCCATGCCCACTGCTTCCACATCTCAGATCCTTGGCA 5784213 Query 364790 ACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAG 364849 ||||||| |||||||| || | || || | || ||||| || ||| | || | Sbjct 5784214 ACAACGAATGCTTCGAGCCTTACACCTCGAACATCTACCAGCGCCGCGTGCTTGCTGGCG 5784273 Query 364850 AATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTG 364909 |||| | ||| || || | || ||||||| ||| |||| || || ||| || Sbjct 5784274 AATTCCAGGTTGTCAACCCCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTCTGGTCTG 5784333 Query 364910 ACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTC 364969 | |||||||||| ||||||||||| || || || || |||||||| || | | Sbjct 5784334 ATGCCATGAAGAACCGTATCATCGCCGAGAACGGCTCCGTTCAGAACATCCCTAACATCC 5784393 Query 364970 CAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTG 365029 ||| || | ||| | | ||||| ||||| ||||| |||||| ||| || || || Sbjct 5784394 CAGCCGAAGTCAAGGCCCTGTACAAGACCGTCTGGGAGATTTCCCAGCGTGCTGTCGTTC 5784453 Query 365030 ATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGA 365089 | ||||| || || |||||||| || ||| ||| ||||||| | ||| | |||| Sbjct 5784454 AGATGGCCGCTGACCGCGGTGCCTTCATCGACCAGTCCCAGTCGCTGAACATCCATATGA 5784513 Query 365090 CTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTA 365149 | || ||| | |||| | || |||||| ||| || ||||| |||||| | Sbjct 5784514 AGGACCCCACCATGGGCAAGATCACCAGCATGCACTTCGCGGGCTGGAAGCTCGGTCTCA 5784573 Query 365150 AGACAGG 365156 |||| || Sbjct 5784574 AGACGGG 5784580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353449707038