Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq3 129 6e-25 seq6 127 2e-24 seq5 86.0 6e-12 >seq3 Length=5970797 Score = 129 bits (142), Expect = 6e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | |||||||| | || | ||| |||||||| || |||||||| ||| Sbjct 630908 GCCACCACGGAGGCGCAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 630967 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| |||||| ||||||||||| ||| |||| | ||||||||||| || || Sbjct 630968 GAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGG 631027 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 631028 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCCAC 631087 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | || ||||| || || || || ||||| ||||||||| Sbjct 631088 CTCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCATG 631136 >seq6 Length=5170228 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| ||| ||||| | || | ||| |||||||| || || ||||| ||| Sbjct 5110412 GCCACCACGCAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGA 5110471 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| ||||| || |||||||| ||| | || | |||||||||||| ||||| Sbjct 5110472 GAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCGGGAGG 5110531 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| ||| ||||| | || | ||||||| ||||||| Sbjct 5110532 GATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGGAAGACTCGAC 5110591 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 |||| || | ||| || ||||| || || || |||| Sbjct 5110592 CTCGAGAGTGATGGTCTTTCCGGTCAGGGTCTTGACGA 5110629 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | ||| | ||| |||||||| || |||||||| || | Sbjct 5110185 CCACCACGCAGACGAAGGACGAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAC 5110244 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || | ||||||||| || |||| | ||||||||||| |||||| Sbjct 5110245 AGGGTGCGGCCATCTTCCAACTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCGGGAGGG 5110304 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | || || | ||||||| Sbjct 5110305 ATGCCCTCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATTGTGTCAGAAGACTCGACT 5110364 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | ||| || ||||| || || || ||||||||||||||| Sbjct 5110365 TCCAGAGTGATGGTCTTTCCGGTGAGGGTCTTGACGAAAATCTGCATG 5110412 Score = 109 bits (120), Expect = 5e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 ||| |||||||| || || ||||| ||| | |||||| ||||| || |||||||| Sbjct 5052168 GGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGTTGCTTGCC 5052109 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 ||| | || | |||||||||||| |||||||| || || ||||| ||| ||| ||| Sbjct 5052108 GGCGAAAATCAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTT 5052049 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 || | || | ||||||| ||||||| |||| || | ||| || ||||| || || Sbjct 5052048 GACGTTGTCGATGGTATCGGAAGACTCGACCTCGAGAGTGATGGTCTTTCCGGTCAGGGT 5051989 Query 131217 TTTTACGA 131224 || |||| Sbjct 5051988 CTTGACGA 5051981 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | |||||| || | ||| | ||||||||||| || ||||||||||| Sbjct 5109956 GCCGCCACGAAGACGCAGGACGAGATGCAGAGTCGACTCCTTCTGGATGTTGTAATCCGA 5110015 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||| || || || |||||||| || ||| |||| | ||||||||||| ||||| Sbjct 5110016 CAGGGTACGTCCATCTTCCAGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCAGGAGG 5110075 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || || || ||| ||| ||| | | || | || |||| || |||| Sbjct 5110076 AATACCCTCCTTATCCTGGATCTTCGACTTCACGTTATCGATCGTGTCGGACGATTCGAC 5110135 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| || || ||||| || || || || || |||||||| Sbjct 5110136 TTCCAGGGTAATAGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 5110183 >seq5 Length=5645814 Score = 86.0 bits (94), Expect = 6e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| | |||||| ||||| ||||||||||| ||| ||| Sbjct 3291299 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 3291358 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||||||||| || ||||| || || ||||| ||| || ||||| | | Sbjct 3291359 TCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 3291418 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | ||||| | |||| ||| | || || || || || || || |||| Sbjct 3291419 CAATGGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTAAGGGTCTTCACGA 3291478 Query 131225 AA 131226 || Sbjct 3291479 AA 3291480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012746898560