Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq4 154 2e-32 seq5 82.4 1e-10 >seq4 Length=5903436 Score = 154 bits (170), Expect = 2e-32 Identities = 470/726 (65%), Gaps = 8/726 (1%) Strand=Plus/Minus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 ||||||||||| || | | | | || ||||| || || | || ||||||| | | Sbjct 5783476 TCGAACTCGTCGCCATAGCAGTCGGCGAGACCAGGGCACTCGTTGGGGCACATCAGAGTC 5783417 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112 || || |||| | || || || ||||| |||||||| || ||||| || || | ||| Sbjct 5783416 CAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGGATCCAGAGGGCGAGGAAT 5783357 Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172 ||||| | | | ||||| || || ||||| || || |||||| | | Sbjct 5783356 AGATCGCGAGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCCAGGAACTCGAAG 5783297 Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232 | ||||| |||||||| || | ||| ||||| | | | || || || ||||| || ||| Sbjct 5783296 ACATCAGCGTGCCACGGCTCAAGGTAGATGGCGAAAGCGCCGGGGCGCTTGTTGCCACCC 5783237 Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292 || || | || | |||||||| || | || | || ||| || || ||||| ||||| Sbjct 5783236 TGGTCGACATAGCGGGCGGTGTTGTTGAACACACGCAGCATGGGGATGATACCGTTGGAG 5783177 Query 63293 GTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 63352 || || ||||| || | || || ||| ||||||| || | || || Sbjct 5783176 GTGCCGTTGGTGCCGGCAATGTAAGAACCAGTGGCACGGATGCGGTGGACGTTCAGGCCA 5783117 Query 63353 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 63412 || || || ||||| || || || | || || || | || || ||||||||||| Sbjct 5783116 ATGCCGCCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTGTCGTAGATGCCCTCG 5783057 Query 63413 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 63472 || || || ||| |||||| | || || ||| ||||| ||| | || ||| Sbjct 5783056 ATGCTGTCCTCCTTCATGTCGACGAGGAAGCAGGAAGACAGTTGAGCCTGGGGGGTGCCC 5782997 Query 63473 GCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63532 ||||| |||| ||| || || || ||||| || |||| || | || ||||| ||| Sbjct 5782996 GCATTGAATAGGGTGGGCGAGGCATGAGTGAAGAATTTGCTGGACATCAGGTTGTAGGTC 5782937 Query 63533 TCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCATTAACAT 63588 || || | || | ||| || |||| || || || || ||||| | ||| Sbjct 5782936 TCGATGACGCGCTCGACATCATCACCCCAGATG----CCGACGGCAACCCGCATAATCAT 5782881 Query 63589 GTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGT 63648 ||||||||| | || |||||||| | | || | || ||| ||| |||| || Sbjct 5782880 GTGCTGAGGGCGCTCTGCGATCTTGCCATCCAACTTGAGCAGGTAAGATCGCTCCAGGGT 5782821 Query 63649 TTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTT 63708 || || || || || | ||| ||||| || || || | || | |||| ||||| Sbjct 5782820 CTTGAAGCCGAAGTACTGGTAGTTGAAGTCACGGTCATAGACGATGGCGGAGTCGAGTTC 5782761 Query 63709 ATCCTT 63714 ||||| Sbjct 5782760 CTCCTT 5782755 Score = 82.4 bits (90), Expect = 1e-10 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 61838 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 61897 |||| ||| | |||||| || |||||||||| || | | ||||| || ||||||||| Sbjct 5784640 TCCTGGTCAACTGTGAACTGGATGGGAGCGGCGGCCGCCTGGGTACGCAGGTAGTACATT 5784581 Query 61898 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 61957 ||||| || |||||||| |||| || || ||||| || || | ||| | Sbjct 5784580 CCCGTCTTGAGACCGAGCTTCCAGCCCGCGAAGTGCATGCTGGTGATCTTGCCCATGGTG 5784521 Query 61958 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62017 || || |||||||| |||| || || || ||||||||||| || | ||| || Sbjct 5784520 GGGTCCTTCATATGGATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCGCGGTCAGCG 5784461 Query 62018 GCCAT 62022 ||||| Sbjct 5784460 GCCAT 5784456 >seq5 Length=5645814 Score = 82.4 bits (90), Expect = 1e-10 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || ||||| || ||| ||||||||||| | || | ||||||||||| || || Sbjct 2728200 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAAAAGGTCAGG 2728259 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 |||||||| ||||| ||||| || ||||| || ||||||||||| | || ||||| Sbjct 2728260 CCGGGCATCAGGCCGCGCTTCTTGAGCCAGAAGATGGACGCAAAGGCACCGCTGAAGAAG 2728319 Query 32781 ATTCCTTCTACTGCCGCAAAGGC 32803 || || || || || || || || Sbjct 2728320 ATACCCTCAACGGCAGCGAAAGC 2728342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631928716400