Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq3 123 2e-23 seq6 116 3e-21 seq5 95.1 1e-14 >seq3 Length=5970797 Score = 123 bits (136), Expect = 2e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || ||||| || |||| ||||| ||||| | || Sbjct 631135 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCGTCC 631076 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || || || ||||||||||| || || ||||| || Sbjct 631075 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 631016 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | ||||| ||||||| ||||||| |||||| Sbjct 631015 CAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTACAAC 630956 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 630955 ATCCAGAAGGAGTCCACC 630938 >seq6 Length=5170228 Score = 116 bits (128), Expect = 3e-21 Identities = 130/174 (75%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || ||||||| || || || | |||||||| | ||| | |||| Sbjct 5051995 ACCGGAAAGACCATCACTCTCGAGGTCGAGTCTTCCGATACCATCGACAACGTCAAGTCG 5052054 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||||||||| || ||||| || || ||||| || || |||||||| Sbjct 5052055 AAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAGCAGCGTCTGATTTTCGCCGGCAAG 5052114 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 || | |||||| ||||||| ||||||| ||||| || || || || |||||| Sbjct 5052115 CAACTTGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAGGAGTCCACC 5052168 Score = 116 bits (128), Expect = 3e-21 Identities = 130/174 (75%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || ||||||| || || || | |||||||| | ||| | |||| Sbjct 5110615 ACCGGAAAGACCATCACTCTCGAGGTCGAGTCTTCCGATACCATCGACAACGTCAAGTCG 5110556 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||||||||| || ||||| || || ||||| || || |||||||| Sbjct 5110555 AAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAGCAGCGTCTGATTTTCGCCGGCAAG 5110496 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 || | |||||| ||||||| ||||||| ||||| || || || || |||||| Sbjct 5110495 CAACTTGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAGGAGTCCACC 5110442 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || || || || |||| ||||| ||||| || | Sbjct 5051686 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTGGAGTCCTCG 5051745 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| || || || ||||||||||| ||||| |||||||| Sbjct 5051746 GATACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGATCAG 5051805 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | ||||| |||||| | ||| |||||| Sbjct 5051806 CAGCGTCTCATTTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTAAGCGACTACAAC 5051865 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 5051866 ATCCAGAAGGAGTCCAC 5051882 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || || || || |||| ||||| ||||| || | Sbjct 5110924 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTGGAGTCCTCG 5110865 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| || || || ||||||||||| ||||| |||||||| Sbjct 5110864 GATACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGATCAG 5110805 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | ||||| |||||| | ||| |||||| Sbjct 5110804 CAGCGTCTCATTTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTAAGCGACTACAAC 5110745 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 5110744 ATCCAGAAGGAGTCCAC 5110728 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | ||||| || || ||||||| ||||| || | | Sbjct 5110411 ATGCAGATTTTCGTCAAGACCCTCACCGGAAAGACCATCACTCTGGAAGTCGAGTCTTCT 5110352 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || || ||||||||||| || || ||||| || Sbjct 5110351 GACACAATCGACAACGTGAAGAGCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 5110292 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| ||||| ||||| || ||| ||||||| | || || |||||| Sbjct 5110291 CAGCGCCTCATCTTTGCGGGCAAGCAGTTGGAAGATGGCCGCACCCTGTCTGACTACAAC 5110232 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || ||| | ||| | || | || |||| || ||| Sbjct 5110231 ATCCAGAAGGAGTCTACCCTGCATCTCGTCCTTCGTCTGCGTGGTGGT 5110184 >seq5 Length=5645814 Score = 95.1 bits (104), Expect = 1e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || || || || |||| || || ||||| | | || ||| | Sbjct 3291480 TTTCGTGAAGACCCTTACGGGCAAGACTATCACCCTCGAGGTGGAGTCTTCGGACACCAT 3291421 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| | |||| || || || ||||||||||| || || ||||| || || || || Sbjct 3291420 TGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCT 3291361 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || |||||||| ||| | |||||| ||||||| ||||||| |||||||| || || Sbjct 3291360 GATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAA 3291301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727953961085