Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq5 125 1e-23 seq3 111 3e-19 seq1 105 1e-17 >seq5 Length=5645814 Score = 125 bits (138), Expect = 1e-23 Identities = 256/376 (68%), Gaps = 11/376 (3%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| | |||||||| ||||||||||||||||||||| ||| Sbjct 2727933 TCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 2727992 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | ||||| ||| | ||| || || |||| || ||||| || |||||||| | Sbjct 2727993 ACCTTGTAGACCTTCTCGTTGCCGAGGGCGACGAGGAGACGGTCGGCAACAAACTCAATG 2728052 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| ||| || |||||||||||| | || || || || | || || || | Sbjct 2728053 TACTGCTTCATGAGAGTAGAGTTCATGCCGAGCAGACCGCAGGGGAGAGCTTCGGTGAGG 2728112 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG--TGCCAGAG 251797 || |||| ||| | || || || | | || ||| ||| ||| ||| | | Sbjct 2728113 AACTCCTGCTCGATTTTGACAGCATCGACGATGATGTCCTGGATCATCTGTTTGCTCGGG 2728172 Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGT 251857 ||||||| || | ||| | || || | | || | ||| |||||||||| Sbjct 2728173 --CGCTTGTT---GAGGTGGGAGAAGAGCAGGCAGGCGAAGTCAGTGTGGAGACCCTCGT 2728227 Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917 | || ||||| ||||||||| | |||||| ||||||| || || ||| |||||| Sbjct 2728228 CACGCGAGATGAGCTCGTTGGAAAAGGTCAGGCCGGGCATCAGGCCGCGCTTCTTGAGCC 2728287 Query 251918 AGAAGATTG-CGCAAA 251932 ||||||| | |||||| Sbjct 2728288 AGAAGATGGACGCAAA 2728303 Score = 87.8 bits (96), Expect = 4e-12 Identities = 196/292 (67%), Gaps = 2/292 (1%) Strand=Plus/Plus Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTCT-CGCGGTATGATGTGGAGCGTTCTATTCC 218576 |||||| || ||||||| ||||| |||||| | || | || |||||| || || Sbjct 3720798 GACTTCGTCAACAAGGAACTCATCCTTTTCAGCATGGCA-GACAACATGCGTTCCATCCC 3720856 Query 218577 CAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCG 218636 ||| | ||||| || ||||| || || ||| ||||||||||| |||||| | Sbjct 3720857 GTCTGTGATCGATGGTCTGAAGCCCGGTCAACGCAAGGTCCTCTTTGCCTGCTTCAAGAG 3720916 Query 218637 GAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGG 218696 ||||| || | || ||||||| | || || | ||||| || || || | | | Sbjct 3720917 AAACCTCGTCAAGGACCAGAAGGTCGTTGAGCTTGCCGGTTACGTCTCTGAGAAGGCCGC 3720976 Query 218697 CTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGT 218756 ||| || ||||| || | || ||| ||||| | ||| |||| || ||| ||| Sbjct 3720977 CTATCACCACGGCGAAATGTCCCTCCAGCAGACCATTATTGGCCTGGCCCAAAACTTTGT 3721036 Query 218757 GGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGT 218808 ||| |||||||| ||| | || |||| |||| | || ||||||||| Sbjct 3721037 TGGCTCCAACAACATCAACGTTCTCGAACCCAGCGGTAACTTCGGTTCTCGT 3721088 >seq3 Length=5970797 Score = 111 bits (122), Expect = 3e-19 Identities = 161/225 (72%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 87691 GCCATCGTCCAGACCCCCCAGTTCTTTGAGGTGCGTCCA-GACCAGACTTGGGTAGAGCG 87749 ||||||||||||| ||| || ||||| || |||| | || ||||| ||||| |||| Sbjct 3024021 GCCATCGTCCAGAGCCCGCAATTCTTCCGCGT-CGTCGACGAGCAGACCTGGGTCGAGCA 3024079 Query 87750 TGCTGCAGGTTCTGTCCAGGAACTGTTCTACCGCTTCATCCAGGTGTCTCGCGAATCATT 87809 | ||| ||| | |||||| |||||||||||| | ||||||| ||||| | Sbjct 3024080 GGGTGCCGGTGCCACCCAGGAGCTGTTCTACCGCGTTGTCCAGGTCAACCGCGACAAGTG 3024139 Query 87810 TGGCGCTGCAGTGTGCGTGGGTACTTGTGCTATGTATCGTCGCGAGGCCCTGGTGCCATT 87869 || || | | ||||| || | || ||||| ||||||| ||||||| | | | Sbjct 3024140 GGGAGCGTCCATCTGCGTCGGCAGCAACGCCATGTACCGTCGCGCTGCCCTGGAGGAAGT 3024199 Query 87870 TGGCGGCACTGCTGAAATCGGTTTCAGCGAGGATGTCCACACCGG 87914 ||||||||||| || || || ||| ||||||||||||||||| Sbjct 3024200 CGGCGGCACTGCCGAGATTGGCTTCTCTGAGGATGTCCACACCGG 3024244 >seq1 Length=7510044 Score = 105 bits (116), Expect = 1e-17 Identities = 169/240 (70%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 280152 TCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATC 280211 ||| || ||| || |||| ||||| || ||||| ||||| || ||||| ||||| ||| Sbjct 4629522 TCTCTGGGCTCTCGTATTGCCGTCATCGGTCCCAACGGTGCTGGCAAGTCCACCCTGATC 4629463 Query 280212 AAAGTCCTGACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATG 280271 || ||||| || || ||| | |||| ||||| | | |||| ||||| Sbjct 4629462 AACGTCCTCACCGGTGAGCTCATCCCCACCGAGGGTGAGATCTACCAGCACGAGAACATC 4629403 Query 280272 CGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACT 280331 || || || ||| || |||||||||||| ||| ||||| |||||||||||| ||| Sbjct 4629402 CGTATCGCCTACATCAAGCAGCACGCTTTCGCCCATATCGATAACCACCTGGACTCCACT 4629343 Query 280332 CCTAACCAATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390 ||| | | ||||| |||||||| | | || | ||| |||||| ||| | |||| || Sbjct 4629342 CCTTCCGAGTACATCCAGTGGCG-TTTCCAGACTGGTGAGGATCGCGAGACTATGGACCG 4629284 Score = 98.7 bits (108), Expect = 2e-15 Identities = 106/138 (77%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760 ||||||| ||||| |||||||| || || || ||| ||||| | ||| | | || Sbjct 4628927 CTCACTCCCGCATGCGCGGTCTGTCCGGTGGTCAGCGTGTCAAGGTCGTCCTTGCCGCCT 4628868 Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820 |||| |||||| | ||||||| ||||||| |||||||||||||||||||| || ||||| Sbjct 4628867 GCTC-GTGGCAGCGCCCTCACTTGATCGTCCTCGACGAGCCTACCAACTACCTTGACCGT 4628809 Query 280821 GAGAGCCTGGGCGCTCTG 280838 || ||||| || ||| Sbjct 4628808 GACTCTCTGGGTGCCCTG 4628791 Score = 87.8 bits (96), Expect = 4e-12 Identities = 154/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 || ||||| || || |||| ||||| || || || |||| ||||||||||| ||| Sbjct 4630329 GGCGAGGACCTTTGCAACTGCACCTTCTCCCTTGCCTACGGTGCCAAGATTCTGCTCAAC 4630270 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 |||| || | | ||||| ||| | || || ||||| ||||||||| || | Sbjct 4630269 CAGACCCATCTTCGCCTGAAGCGCGGCCAGCGCTACGGTCTTTGCGGTCCCAACGGTTCC 4630210 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| ||||| ||||||||||| |||| ||| | | ||| ||||| | ||| Sbjct 4630209 GGCAAGTCTACTCTCATGCGCGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCA 4630151 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 ||||| | ||| || | || ||||||||| ||||||| Sbjct 4630150 GGACGAGGTCAAGACCGTCTTCGTCGAGCACGACCTCGACTC 4630109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836681477569