Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq4 509 3e-139 seq5 224 2e-53 >seq4 Length=5903436 Score = 509 bits (564), Expect = 3e-139 Identities = 1301/1963 (66%), Gaps = 59/1963 (3%) Strand=Plus/Minus Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800 ||||||||| ||| ||| |||| |||| ||| | |||||||||||| || |||||||| | Sbjct 5784627 TGAACTGGATGGGAGCGGCGGCCGCCTGGGTACGCAGGTAGTACATTCCCGTCTTGAGAC 5784568 Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860 | |||| | || ||||||| || | ||| ||| || | || Sbjct 5784567 CGAGCTTCCAGCCCGCGAAGTGCATGCTGGTGATCTTGCCCATGGTGGG---------GT 5784517 Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920 ||| || | || ||| || |||||| |||||||| ||||| | || || |||| Sbjct 5784516 CCTT---CATATGGATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCGCGGTCAGCGG 5784460 Query 243921 CCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGT 243980 |||| | || | ||| || ||||| | | |||||||| | || ||||| | Sbjct 5784459 CCATCTGAACGACAGCACGCTGGGAAATCTCCCAGACGGTCTTGTACAGGGCCTTGACTT 5784400 Query 243981 GCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCA 244040 | |||| ||||||||| || ||||| || | | |||||| || | || Sbjct 5784399 CGGCTGGGATGTTAGGGATGTTCTGAACGGAGCCGTTCTCGGCGATGATACGGTTCTTCA 5784340 Query 244041 TGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACCT 244100 || ||| ||| || |||| | | || ||| || ||| ||| || |||| Sbjct 5784339 TGGCATCAGACCAGAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACCT 5784280 Query 244101 GAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCT 244160 | || || || | ||||||||||||||||||| ||| | || ||||||| || | Sbjct 5784279 GGAATTCGCCAGCAAGCACGCGGCGCTGGTAGATGTTCGAGGTGTAAGGCTCGAAGCATT 5784220 Query 244161 CCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGT 244220 | ||||||| || ||||| | ||| ||||| |||||||| | || |||| |||| Sbjct 5784219 CGTTGTTGCCAAGGATCTGAGATGTGGAAGCAGTGGGCATGGGGGCAACGAGCAAGCTGT 5784160 Query 244221 TCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCC---AGTCCCACATGCCCG 244277 | | || |||||| || ||| ||| ||| ||| ||||||| || || Sbjct 5784159 TGCGGACTCCGTGCTGCTTGAT-------CTG--CTCCTTCAGAGAGTCCCA-ATCCC-- 5784112 Query 244278 AGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGC 244337 ||||||| | | |||| ||||||| || |||| || | |||| | ||| ||| Sbjct 5784111 AGAGGTCAGTGGGCTTGACATCCCACATATCGTACTGGAGGATTCCCTGGGAGACAGGGG 5784052 Query 244338 TGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTC-TCGTCGAGG 244396 ||||||||| || | ||||| || | ||| || ||||| ||| | | ||| ||| Sbjct 5784051 AGCCCTCGTACGTGGAGTAGGTGCCCTGCTCCTGAGCAAGCTTGCAGGACATGGTC-AGG 5783993 Query 244397 GCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTG 244456 || |||| |||||||||||| |||||| |||||| | || ||||||| | | | Sbjct 5783992 GCAGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCACGGGCCTCGGGAGACTCG 5783933 Query 244457 AAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGT 244516 || || |||| | | |||| |||||||||| ||||| || || | |||||||| Sbjct 5783932 AAAGGCATGCGGAGGGCGAGGAAGGCGTCGGCCAGACCCTGAACACCCAGACCGATGGGA 5783873 Query 244517 CTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACC 244576 | || ||| ||||| | ||| || | |||||||| ||||| ||||||| | | Sbjct 5783872 CGATGGCGCATGTTGCTGTTGCGGGCCTCCTGAACGGGGTAGTAGTTGACGTCGATGATC 5783813 Query 244577 TTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCG 244636 ||||| ||||| | | | | ||| ||| |||| || |||||||| | Sbjct 5783812 TTGTTCAGGTTCCTCACAACGACCTGTGTGACCTCGTGCAGCTTCTTGAAGTCGTAGAC- 5783754 Query 244637 TAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTG 244696 | ||||| | || ||| || || | ||| || | | ||| |||||| Sbjct 5783753 -----ACCCTCG----TTGTAGTCC--ACGAAAGAGGGGAGCGCCAAGGAGGCAAGGTTG 5783705 Query 244697 CAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCAC 244756 ||||| || ||||| || | | ||||| || ||||| ||||| ||||| || Sbjct 5783704 CAGACAGCGACCTCATCAGGGGCACAGTACTCGATGATCTCCGTGCACAGGTTGGAGCTG 5783645 Query 244757 TTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATG 244816 ||||||||| |||| || || ||| ||| |||| | ||||||||| |||||| Sbjct 5783644 CGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTCCTGTTGGCGTGGTCCTTGTAAAGCATG 5783585 Query 244817 AAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTG 244876 ||||| || |||||| |||||| |||||| | | |||||| | | ||| || Sbjct 5783584 AAGGGGTTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCCTG 5783525 Query 244877 ACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGG 244936 | ||| | ||| |||||||| | |||||| |||||| |||||||||||| | Sbjct 5783524 ATGGTCTTCCGACCCTTGCCCGCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCGTCG 5783465 Query 244937 CCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCG 244996 || || ||| | || || |||||| |||||||| ||| |||| |||||| Sbjct 5783464 CCATAGCAGTCGGCGAGACCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTC 5783405 Query 244997 TCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTC 245056 | || ||| | || ||||||||| ||||||||||||||||| |||| || || | | Sbjct 5783404 TTCTCGACACGCTTCATGAAGAGATCGGGGATCCAGAGGGCGAGGAATAGATCGCGAGCA 5783345 Query 245057 CTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGC 245116 | ||| ||| ||| |||||| | ||| |||| || || ||||| || ||||| Sbjct 5783344 CGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCCAGGAACTCGAAGACATCAGCGTGC 5783285 Query 245117 CAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATC 245176 || ||||| | ||||| |||| |||||||| ||||||||||| |||||||| | | Sbjct 5783284 CACGGCTCAAGGTAGATGGCGAAAGCGCCGGGGCGCTTGTTGCCACCCTGGTCGA----C 5783229 Query 245177 CTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTT 245232 | || ||| |||||| | ||||| | || | || ||||| ||| |||||| Sbjct 5783228 ATAGCGGGCGGTGTTGTTGAACACACGCAGCATGGGGATGATACCGTTGGAGGTGCCGTT 5783169 Query 245233 GGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCC 245292 |||||| ||||| | || || | | || | | || | || ||| | ||||| Sbjct 5783168 GGTGCCGGCAATGTAAGAACCAGTGGCACGGATGCGGTGGACGTTCAGGCCAATGCCGCC 5783109 Query 245293 GGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTC 245352 || |||||| || | ||| ||| |||||| |||||| |||||||| |||||||| Sbjct 5783108 AGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTGTCGTAGATGCCCTCGATGCTGTC 5783049 Query 245353 CGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAA 245412 | |||||||| || || |||||||| ||||| || | || |||| ||| || ||||| Sbjct 5783048 CTCCTTCATGTCGACGAGGAAGCAGGAAGACAGTTGAGCCTGGGGGGTGCCCGCATTGAA 5782989 Query 245413 CAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGA-GCA 245471 || ||||| ||| || || ||| | ||| || | | ||| |||| || | Sbjct 5782988 TAGGGTGGGCGAGGCATGAGTGAAGAATTTGCTGGACATCAGGTTGTAGGTCTCGATGAC 5782929 Query 245472 GAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTG-GGGC 245530 | || |||| | || || ||| | ||| || ||| | ||||||| |||| Sbjct 5782928 GCGC-TCGACATCATCACCCCAGATGCCGACGGCAACCCGCATAATCATGTGCTGAGGGC 5782870 Query 245531 G-TCT-CGATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACC 245588 | ||| |||| || || |||||||| ||| || ||||| || |||||||| | Sbjct 5782869 GCTCTGCGATCTTGCCATC---CAACTTGAGCAGGTAAGATCGCTCCAGGGTCTTGAAGC 5782813 Query 245589 CAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAGTCTCTCGGCGT 245648 | |||||| |||| ||||| || | || ||| | ||||||| ||| || Sbjct 5782812 CGAAGTACTGGTAGTTGAAGTCACGGTCATAGACGATGGCGGAGTCGAGTTCCTCCTTGT 5782753 Query 245649 GCTTC-TGACTGACCTCGTAAAACTTTTGCGCTATGAGGGGAG 245690 || || |||| | |||||| | |||||| || | ||||| Sbjct 5782752 GCCTCATGAC-GCACTCGTATGTTTCTTGCGCGATCATGGGAG 5782711 >seq5 Length=5645814 Score = 224 bits (248), Expect = 2e-53 Identities = 325/448 (73%), Gaps = 17/448 (4%) Strand=Plus/Minus Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764 ||||| || || | ||||| ||||| ||||||||| || ||||| || ||||||||| Sbjct 2728348 CTGGTCGCTTTCGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCGTCCATCTTC 2728289 Query 42765 TGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 ||||||||| || | ||||||||| || ||||| || ||||| |||||| | Sbjct 2728288 TGGCTCAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTTTCCAACGAGCTCATCTCGCGT 2728229 Query 42825 GACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAG 42884 |||||||| || || | ||||| |||||||| || ||||| |||||||| ||||| Sbjct 2728228 GACGAGGGTCTCCACACTGACTTCGCCTGCCTGCTCTTCTC---CCACCTCA---ACAAG 2728175 Query 42885 CCCTCG---AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAG 42941 | | || || || | ||| || ||||||| || || || | |||||| ||||| Sbjct 2728174 CGCCCGAGCAAACAGATGATCCAGGACATCATCGTCGATGCTGTCAAAATCGAGCAGGAG 2728115 Query 42942 TTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGAC-CTCATGTGCAA 43000 |||||||| | | || ||| ||| |||||||||| | | || |||||| | Sbjct 2728114 TTCCTCACCGAAGCTCTCCCCTGCGGTCTGCTCGGCATGAA-CTCTACTCTCATGAAGCA 2728056 Query 43001 GTACATCCAGTACGTCGCCGACCATCTCCT-GT-GCCAGATGGGTCTC-AGCCGCCTCTA 43057 |||||| ||| || ||||||| |||||| || ||| | || | || | |||| Sbjct 2728055 GTACATTGAGTTTGTTGCCGACCGTCTCCTCGTCGCC--CTCGGCAACGAGAAG-GTCTA 2727999 Query 43058 CAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTT 43117 ||| | |||||||||||| |||||||||||||| | | |||||||||||||| Sbjct 2727998 CAAGGTCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACTT 2727939 Query 43118 TTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||||||| ||||||||||||||| Sbjct 2727938 CTTCGAGAAGCGTGTCGCCGACTACCAG 2727911 Score = 125 bits (138), Expect = 1e-23 Identities = 232/337 (69%), Gaps = 9/337 (3%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || |||| |||||| ||||||||||| |||||| Sbjct 2728814 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACTGCCGAGGAGATCGACCTG 2728755 Query 42360 GCCAAGGACACGGCCGGCTGGGAGT-CACTGTCTGAGA--ACGAAAAGTTTTTCCTCAAA 42416 ||||||| || ||| | || || || | || || | ||| || Sbjct 2728754 TCCAAGGATCTCCACGATTGGAACAACAAGATCAACGATGATGAGAAATACTTCATCTCT 2728695 Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476 |||| ||||| |||||||||||||| |||||||| ||||| |||||||| | | | Sbjct 2728694 CACATCCTGGCTTTCTTCGCCGCCTCCGACGGCATTGTCAACGAGAACCTCGTCGAGCGT 2728635 Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536 || | ||||| ||| ||||| ||||||||||||||||||||||| || Sbjct 2728634 TTTAGCGGCGAGGTCCAGATTCCCGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGATG 2728575 Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCC 42593 |||||| | ||||| ||| ||| || ||||||| | || |||||| ||| || Sbjct 2728574 GAGAACATCCACTCCGAGACCTACTCC---CTGCTCATTGATACCTACATCAAGGAGCCT 2728518 Query 42594 GTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGA 42630 | | || | | || ||||| ||||| || |||| Sbjct 2728517 TCCCAACGCACCTACCTCTTCAACGCCATTGACACGA 2728481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944339093761840