Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq3 109 6e-19 seq6 107 2e-18 seq5 91.5 2e-13 >seq3 Length=5970797 Score = 109 bits (120), Expect = 6e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 |||| ||| | || | ||| |||||| || || ||||| || | || || || || Sbjct 630921 CGCAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCG 630980 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || || |||||||| || ||||| || || ||||||||||||| || | || ||||||| Sbjct 630981 TCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTG 631040 Query 42114 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 42173 ||| ||| || |||| | | | |||||| ||| ||||| || | ||||| Sbjct 631041 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCCACCTCAAGGGTGATA 631100 Query 42174 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || ||||| || ||||| || ||||| ||||| Sbjct 631101 GTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 631135 >seq6 Length=5170228 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || |||| || ||||||||||||||||| Sbjct 5051877 CTCCTTCTGGATGTTGTAGTCGCTTAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 5051818 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| |||||||| |||| || | || |||||||||| ||| || |||| ||| Sbjct 5051817 AATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 5051759 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | || || || ||||| || | |||||||| ||||| || || ||||| | Sbjct 5051758 TGTCAATGGTATCCGAGGACTCCACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGA 5051699 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 5051698 CGAAGATCTGCAT 5051686 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || |||| || ||||||||||||||||| Sbjct 5110733 CTCCTTCTGGATGTTGTAGTCGCTTAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 5110792 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| |||||||| |||| || | || |||||||||| ||| || |||| ||| Sbjct 5110793 AATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 5110851 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | || || || ||||| || | |||||||| ||||| || || ||||| | Sbjct 5110852 TGTCAATGGTATCCGAGGACTCCACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGA 5110911 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 5110912 CGAAGATCTGCAT 5110924 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| || | ||||| || |||||| || || |||||||| | ||| || || | Sbjct 5109968 ACGCAGGACGAGATGCAGAGTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTACGTCC 5110027 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| |||||||| || || ||||||||||| | || | | |||||| Sbjct 5110028 ATCTTCCAGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTT 5110087 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| || || | | | | ||||||| |||||| || || | || || Sbjct 5110088 ATCCTGGATCTTCGACTTCACGTTATCGATCGTGTCGGACGATTCGACTTCCAGGGTAAT 5110147 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || ||||| || || ||||| |||||||| ||||| Sbjct 5110148 AGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 5110183 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| |||| ||| || || | || || | |||||| || || || Sbjct 5110220 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAACTGCTTGCCCGCAAA 5110279 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||||| || | || |||||||||| ||| || || | ||| Sbjct 5110280 GATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTCA-CGT 5110338 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| || || || || | |||||||| || || || || ||||| | Sbjct 5110339 TGTCGATTGTGTCAGAAGACTCGACTTCCAGAGTGATGGTCTTTCCGGTGAGGGTCTTGA 5110398 Query 42196 CAAAGATTTGCAT 42208 | || || ||||| Sbjct 5110399 CGAAAATCTGCAT 5110411 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||||| || | ||| |||||| || |||||||| || | || || || | Sbjct 5110424 ACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCC 5110483 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || || ||||| || ||||| || || ||||||||||||| || | | |||||| Sbjct 5110484 ATCCTCAAGTTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCGGGAGGGATACCCTCCTT 5110543 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 |||| ||| || |||| ||| | | | || ||| || || || |||| |||| Sbjct 5110544 GTCCTGGATCTTCGACTTGA-CGTTGTCGATGGTATCGGAAGACTCGACCTCGAGAGTGA 5110602 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTAC 42196 |||| || || || || ||||| || Sbjct 5110603 TGGTCTTTCCGGTCAGGGTCTTGAC 5110627 >seq5 Length=5645814 Score = 91.5 bits (100), Expect = 2e-13 Identities = 131/182 (72%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 |||| || || ||||| || | || || || | || || |||||||| || ||||| | Sbjct 3291299 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 3291358 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138 | || ||||||||||||| || | || |||||||||| ||| || |||| ||| | Sbjct 3291359 TCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTG 3291417 Query 42139 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||| || ||||| |||| ||||| || |||||||| || ||||| || Sbjct 3291418 TCAATGGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTAAGGGTCTTCACG 3291477 Query 42198 AA 42199 || Sbjct 3291478 AA 3291479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212738888560