Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq6 118 1e-21 seq3 98.7 1e-15 >seq6 Length=5170228 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||| || ||||| | || || || || || |||||||| || | Sbjct 5110184 ACCACCACGCAGACGAAGGACGAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCAGA 5110243 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | ||||| | ||||||||| ||| | ||||| ||||||||||||||||| Sbjct 5110244 CAGGGTGCGGCCATCTTCCAACTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCGGGAGG 5110303 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| || || | ||| ||| | || || Sbjct 5110304 GATGCCCTCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATTGTGTCAGAAGACTCGAC 5110363 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | ||| | |||||| ||||| | || || |||||||| ||||| Sbjct 5110364 TTCCAGAGTGATGGTCTTTCCGGTGAGGGTCTTGACGAAAATCTGCAT 5110411 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || || | || || || || || || ||||| || | || |||||| | || Sbjct 5110428 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCC 5110487 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||| ||||||||||| |||| || ||||||||||||||||| || || || || || Sbjct 5110488 TCAAGTTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 5110547 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | ||||| | || || || | ||| | |||| Sbjct 5110548 TGGATCTTCGACTTGACGTTGTCGATGGTATCGGAAGACTCGACCTCGAGAGTGATGGTC 5110607 Query 64412 TTGCCGGTCAAAGTTTTTACGA 64433 || ||||||| || || |||| Sbjct 5110608 TTTCCGGTCAGGGTCTTGACGA 5110629 Score = 89.7 bits (98), Expect = 5e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || || ||||| || | || |||||| | || ||||| ||||||||| Sbjct 5052167 GTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGTTGCTTGCCG 5052108 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || |||| || ||||||||||||||||| || || || || || || || || ||| Sbjct 5052107 GCGAAAATCAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTG 5052048 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | ||||| | || || || | ||| | |||||| ||||||| || Sbjct 5052047 ACGTTGTCGATGGTATCGGAAGACTCGACCTCGAGAGTGATGGTCTTTCCGGTCAGGGTC 5051988 Query 64427 TTTACGA 64433 || |||| Sbjct 5051987 TTGACGA 5051981 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | ||||| || || || ||||||||||| | | ||| || | ||| Sbjct 5109972 AGGACGAGATGCAGAGTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTACGTCCATCT 5110031 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||| || || | || || ||||||||||| |||||||| || || || || Sbjct 5110032 TCCAGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTATCC 5110091 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || || | || ||||| | || | ||| Sbjct 5110092 TGGATCTTCGACTTCACGTTATCGATCGTGTCGGACGATTCGACTTCCAGGGTAATAGTC 5110151 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||| | || || || || || ||||| Sbjct 5110152 TTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 5110183 >seq3 Length=5970797 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || |||| || || || || || |||||||| || | || |||||| |||| Sbjct 630924 AGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 630983 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||||||||| | || || |||||||||||||| || || || || || || Sbjct 630984 TCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 631043 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | || || | ||||| || | || | ||| Sbjct 631044 TGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTC 631103 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || | || || ||||| || ||||| Sbjct 631104 TTACCCGTGAGGGTCTTGACGAAGATCTGCAT 631135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644743789960