Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq6 129 6e-25 seq3 102 8e-17 seq5 98.7 9e-16 >seq6 Length=5170228 Score = 129 bits (142), Expect = 6e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | |||| || | ||| ||||| || || || ||||| |||| Sbjct 5051912 CCACCGCGAAGACGGAGAACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTT 5051853 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || |||||| | || | |||||||||||||| || Sbjct 5051852 AGGGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCGGGGGGA 5051793 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| ||| || ||||| |||| || | ||| |||| ||| || Sbjct 5051792 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG-TCAATGGTATCCGAGGACTCCAC 5051734 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115 || | ||| | || ||||| |||||||| || || || |||||||||| Sbjct 5051733 CTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCATGG 5051684 Score = 129 bits (142), Expect = 6e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | |||| || | ||| ||||| || || || ||||| |||| Sbjct 5110698 CCACCGCGAAGACGGAGAACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTT 5110757 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || |||||| | || | |||||||||||||| || Sbjct 5110758 AGGGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCGGGGGGA 5110817 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| ||| || ||||| |||| || | ||| |||| ||| || Sbjct 5110818 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG-TCAATGGTATCCGAGGACTCCAC 5110876 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115 || | ||| | || ||||| |||||||| || || || |||||||||| Sbjct 5110877 CTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCATGG 5110926 Score = 109 bits (120), Expect = 5e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || || ||||| || || ||||| ||| || | ||| || || Sbjct 5110215 GTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAACTGCTTGCCC 5110274 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | |||||||| |||||||| ||||||||||||||| ||| || ||| Sbjct 5110275 GCAAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTC 5110334 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||||| | | ||||||||| | || | || || ||||| || || Sbjct 5110335 ACGTTG-TCGATTGTGTCAGAAGACTCGACTTCCAGAGTGATGGTCTTTCCGGTGAGGGT 5110393 Query 127096 TTTTACAAAAATCTGCATG 127114 || || |||||||||||| Sbjct 5110394 CTTGACGAAAATCTGCATG 5110412 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| || || |||||||| ||| Sbjct 5110413 CCACCACGCAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGAG 5110472 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || || || || || ||| | |||| |||||||| |||||||| Sbjct 5110473 AGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCGGGAGGG 5110532 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| ||| ||||| |||| |||| ||| || | | |||||| Sbjct 5110533 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTG-TCGATGGTATCGGAAGACTCGAC 5110591 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| || | || || |||||||| || || || Sbjct 5110592 CTCGAGAGTGATGGTCTTTCCGGTCAGGGTCTTGAC 5110627 Score = 104 bits (114), Expect = 2e-17 Identities = 136/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || |||||||| ||| | ||||| ||| || || || || || Sbjct 5052167 GTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGTTGCTTGCCG 5052108 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | |||| |||||||| |||||||| || |||||||||||| ||| ||| |||| Sbjct 5052107 GCGAAAATCAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTG 5052048 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||| || | | |||||| |||| || | || || |||||||| || Sbjct 5052047 ACGTTG-TCGATGGTATCGGAAGACTCGACCTCGAGAGTGATGGTCTTTCCGGTCAGGGT 5051989 Query 127096 TTTTAC 127101 || || Sbjct 5051988 CTTGAC 5051983 >seq3 Length=5970797 Score = 102 bits (112), Expect = 8e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| ||| | || | || ||||| || || || ||||| ||| Sbjct 630909 CCACCACGGAGGCGCAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 630968 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||| || || ||| |||||| |||||||| ||||| || Sbjct 630969 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 631028 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| || ||||| | |||| |||||| | ||| || Sbjct 631029 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCCACC 631088 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115 || | ||| | || || || || || || || || || |||||||||| Sbjct 631089 TCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCATGG 631137 >seq5 Length=5645814 Score = 98.7 bits (108), Expect = 9e-16 Identities = 132/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| ||| | ||||| ||| || ||||| || || ||| ||||| Sbjct 3291301 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 3291360 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044 | |||||||| ||||| || ||||||||||||||| ||| || ||||| |||| || Sbjct 3291361 AGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG-TC 3291419 Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 | |||||||| | ||| || |||| ||| | || ||||| || || || || || || Sbjct 3291420 AATGGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTAAGGGTCTTCACGAA 3291479 Query 127105 A 127105 | Sbjct 3291480 A 3291480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500746506160