Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq4 188 9e-43 seq5 95.1 1e-14 >seq4 Length=5903436 Score = 188 bits (208), Expect = 9e-43 Identities = 1060/1685 (63%), Gaps = 39/1685 (2%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 || ||||||||||| ||||||||||| || |||||||| | | ||||| || Sbjct 5784595 CGCAGGTAGTACATTCCCGTCTTGAGACCGAGCTTCCAGCCCGCGAAGTGCATGCTGGTG 5784536 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | |||| | || || | ||| || ||||| ||||| || ||||||||| Sbjct 5784535 ATCTTGCCCATGGTGGGGTCCTTCATATGGATGTTCAGCGACTGGGACTGGTCGATGAAG 5784476 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 115737 || || || || ||||| | || ||| | | || ||||| || || || Sbjct 5784475 GCACCGCGGTCAGCGGCCATCTGAACGACAGCACGCTGGGAAATCTCCCAGACGGTCTTG 5784416 Query 115738 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTG 115797 || ||| ||| | || ||||||| | ||| || || | ||||| || | Sbjct 5784415 TACAGGGCCTTGACTTCGGCTGGGATGTTAGGGATGTTCTGAACGGAGCCGTT---CTCG 5784359 Query 115798 ACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCA-- 115852 | |||| | | |||||| | | ||||||||||| || | || |||| | Sbjct 5784358 GCGATGATACGGTTCTTCATGGCATCAGACCAGAGACCCATGTCGACAAGGTCCTTGAGC 5784299 Query 115853 --CGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTT 115910 | ||| | |||||||| || || || || || ||| | | | |||||||| Sbjct 5784298 AGCCAGGGG----TTGACAACCTGGAATTCGCCAGCAAGCACGCGGCGCTGGTAGATGTT 5784243 Query 115911 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 115970 | ||||| ||||| ||||| || ||||| || | ||| || | |||||| || ||||| Sbjct 5784242 CGAGGTGTAAGGCTCGAAGCATTCGTTGTTGCCAAGGATCTGAGATGTGGAAGCAGTGGG 5784183 Query 115971 CATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGC 116030 |||||| || | ||| | ||||||||||| || | | | || | ||||| || | Sbjct 5784182 CATGGGGGCAACGAGCAAGCTGTTGCGGACTCCGTGCTGCTTGATCTGCTCCTTCAGAGA 5784123 Query 116031 GTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTG 116090 |||||| || || | | | || | ||||||||||| |||||||||| || || Sbjct 5784122 GTCCCAATCCCAGAGGTCAGTGGGCTTGACATCCCACATATCGTACTGGAGGATTCCCTG 5784063 Query 116091 GGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCT 116150 ||| | || || ||||| | || || | ||||| ||| || | | | || Sbjct 5784062 GGAGACAGGGGAGCCCTCGTACGTGGAGTAGGTGCCCTGCTCCTGAGCAAGCTTGCAGGA 5784003 Query 116151 CGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTC 116210 | ||||| ||||| || || |||||||| || | || | | |||||| Sbjct 5784002 CATGGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCACGGGCCTC 5783943 Query 116211 GTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAG 116270 | || || || | | ||| | || | || || ||||| || ||||| || Sbjct 5783942 GGGAGACTCGAAAGGCATGCGGAGGGCGAGGAAGGCGTCGGCCAGACCCTGAACACCCAG 5783883 Query 116271 GCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCT 116330 || || || ||||| | ||| || || || || || ||||| || | || Sbjct 5783882 ACCGATGGGACGATGGCGCATGTTGCTGTTGCGGGCCTCCTGAACGGGGTAGTAGTTGAC 5783823 Query 116331 ATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTA 116390 ||||| | | | || || || | || |||| ||||| || || ||||| | | | Sbjct 5783822 GTCGATGATCTTGTTCAGGTTCCTCACAACGACCTGTGTGACCTCGTGCAGCTTCTTGAA 5783763 Query 116391 ATCAAAACTGCGAGTCTCTTCATTG---ACATACTTAGGAAGGGCGATTGACGCCAGATT 116447 || | | | ||| | | | || | || || || | || || || || Sbjct 5783762 GTCGTA---GACACCCTCGTTGTAGTCCACGAAAGAGGGGAGCGCCAAGGAGGCAAGGTT 5783706 Query 116448 ACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACT 116507 || |||| | |||||| || |||||| || || ||||| |||| || || || Sbjct 5783705 GCAGACAGCGACCTCATCAGGGGCACAGTACTCGATGATCTCCGTGCACAGGTTGGAGCT 5783646 Query 116508 CTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCAT 116567 |||||||| | |||||| || || ||| |||| |||||||| ||||| Sbjct 5783645 GCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTCCTGTTGGCGTGGTCCTTGTAAAGCAT 5783586 Query 116568 ATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGCTGG 116627 | || | || ||||| || |||| || ||| || || | ||| | || |||| Sbjct 5783585 GAAGGGGTTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCAGA-----GCTTCTGG 5783531 Query 116628 -CACAG-TGGCGTTGGCTCGC---CCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAAC 116682 | | | ||| || | | ||| ||| |||||||||| ||| || ||||| ||| Sbjct 5783530 GCCCTGATGGTCTTCCGACCCTTGCCCGCCTTCTCGTACTTTTCGTACAGAGCCTCGAAC 5783471 Query 116683 TCTTCACCCACAGCC-TCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTG 116741 || || || | ||| || | ||| || || || | || || | |||| ||| | Sbjct 5783470 TCGTCGCC-ATAGCAGTCGGCGAGACCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTC 5783412 Query 116742 ACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATC 116801 || || ||| || |||||||||||||| || ||||||||||| || ||| ||||| Sbjct 5783411 GCCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGGATCCAGAGGGCGAGGAATAGATC 5783352 Query 116802 CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATC 116861 ||| || | || || | || || || |||| |||| || || | || ||| Sbjct 5783351 GCGAGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCCAGGAACTCGAAGACATC 5783292 Query 116862 CGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGTT 116918 ||||||||||| || ||||| | |||| | || ||| ||| |||||| Sbjct 5783291 AGCGTGCCACGGCTCAAGGTAGATGGCGAAAGCGCCGGGGCGCTTGTTGCCACCCTGGTC 5783232 Query 116919 TACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCC 116978 ||||| | || || ||| || || || ||||| || |||||||| | || ||| Sbjct 5783231 GACATAGCGGGCGGTGTTGTTGAACACACGCAGCATGGGGATGATACCGTTGGAGGTGCC 5783172 Query 116979 ATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACC 117038 || || || ||| ||| |||| | || ||||| || || ||||| || Sbjct 5783171 GTTGGTGCCGGCAATGTAAGAACCAGTGGCACGGATGCGGTGGACGTTCAGGCCAATGCC 5783112 Query 117039 CCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGA 117098 || ||| ||| || || || || | |||| || ||||||| || ||||| Sbjct 5783111 GCCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTGTCGTAGATGCCCTCGATGCT 5783052 Query 117099 GTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTT 117158 ||| |||| | ||| |||||||||| |||| ||| | | || || || || || Sbjct 5783051 GTCCTCCTTCATGTCGACGAGGAAGCAGGAAGACAGTTGAGCCTGGGGGGTGCCCGCATT 5782992 Query 117159 GAAGAGGGTTGGTGTCGCGTGGATGAACA--TACCTTGGGACATCTTATCGTAGGTCTCC 117216 ||| ||||| || | || || |||| | | || ||||||| | ||||||||| Sbjct 5782991 GAATAGGGTGGGCGAGGCATGAGTGAAGAATTTGCT--GGACATCAGGTTGTAGGTCTCG 5782934 Query 117217 AAGAC 117221 | ||| Sbjct 5782933 ATGAC 5782929 >seq5 Length=5645814 Score = 95.1 bits (104), Expect = 1e-14 Identities = 293/448 (65%), Gaps = 18/448 (4%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| |||| ||||||||||||||||| ||||| || |||| ||| |||||||| Sbjct 2727914 GTAGTCGGCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTCCAT 2727973 Query 127291 AAAATCAAATGGGTT-----CTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGG 127345 || || || ||||| | ||| || | |||| || | |||| Sbjct 2727974 GAAGTCGAAGGGGTTGGTGACCTTGTAGACCTTCTCGTTG-----CCGAGGGCGACGAGG 2728028 Query 127346 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 127405 ||||| || | || |||||||||||| ||| ||||||||| |||| || Sbjct 2728029 AGACGGTCGGCAACAAACTCAATGTACTGCTTCATGAGAGTAGAGTTCATGCCGAGCAGA 2728088 Query 127406 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATG 127465 || ||||| || || || |||| ||| ||| || | ||||| || | |||| Sbjct 2728089 CCGCAGGGGAGAGCTTCGGTGAGGAACTCCTGCTCGATTTTGACAGCATCGACGATGATG 2728148 Query 127466 GCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTT-GAAGAGTTCCA--CAG-C 127521 | || || | | | || | ||| | | || |||||| || ||| | Sbjct 2728149 TCCTGGATCATCTGTTTGCTCGGGCGCTTGT-TGAGGTGGGAGAAGAG---CAGGCAGGC 2728204 Query 127522 AAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGG 127581 || || |||||||||||||||||| |||||||| || || || ||| ||| || || Sbjct 2728205 GAAGTCAGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAAAAGGTCAGGCCGGG 2728264 Query 127582 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCC 127641 ||| || || |||||||| | |||||| || | ||| | || ||||||||| || Sbjct 2728265 CATCAGGCCGCGCTTCTTGAGCCAGAAGATGGACGCAAAGGCACCGCTGAAGAAGATACC 2728324 Query 127642 CTCCACACACGCGAACGCAAATAGACGC 127669 ||| || ||||| || | |||||| Sbjct 2728325 CTCAACGGCAGCGAAAGCGACCAGACGC 2728352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507130980440