Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq4 141 1e-28 >seq4 Length=5903436 Score = 141 bits (156), Expect = 1e-28 Identities = 449/683 (66%), Gaps = 16/683 (2%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCC 203898 || ||| || |||||||| |||| |||| | | | | | ||| |||||||| || Sbjct 5784638 CTGGTCAACTGTGAACTGGATGGGAGCGGCGGCCGCCTGGGTACGCAGGTAGTACATTCC 5784579 Query 203899 GGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGG 203958 ||||| || || || ||| || | ||||||| | | |||| || | |||| Sbjct 5784578 CGTCTTGAGACCGAGCTTCCAGCCCGCGAAGTGCATGCTGGTGATCTTGCCCATGGTGGG 5784519 Query 203959 GTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGG 204017 ||| ||| || |||||||| |||||| ||||||||||| ||| || || || |||| Sbjct 5784518 GTCCTTCATATGGATGTTCAGCGACTGGGACTGGTCGATGAA-GGCACCGCGGTCAGCGG 5784460 Query 204018 CCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGT 204077 |||| | | | | ||| ||||||||||| || |||||| ||| | | || | Sbjct 5784459 CCATCTGAACGACAGCACGCTGGGAAATCTCCCAGACGGTCTTGTACAGGGCCTTGACTT 5784400 Query 204078 --GTTGAGGCACATCTTCCC-ACGTCCTGATCG-AGCCGTTGTCGGCCATCAGTCTCATC 204133 | || | || || | || |||| || ||||||| ||||| || | | || Sbjct 5784399 CGGCTGGG----ATGTTAGGGATGTTCTGAACGGAGCCGTTCTCGGCGATGATACGGTTC 5784344 Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || | | || ||| | |||| || || ||| | ||| |||||||| Sbjct 5784343 TTCATGGCATCAGACCAGAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACA 5784284 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | ||| || || || | ||||| | || | | | ||| |||| | || ||||| Sbjct 5784283 ACCTGGAATTCGCCAGCAAGCACGCGGCGCTGGTAGATGTTCGAGGTGTAAGGCTCGAAG 5784224 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 ||||||||||| | ||||||| ||| || ||||||||||| || | ||||| | Sbjct 5784223 CATTCGTTGTTGCCAAGGATCTGAGATGTGGAAGCAGTGGGCATGGGGGCAACGAGCAAG 5784164 Query 204314 GAGTTGCGCACACCGTATTTTTGGACCCTGC-GCTTCAGAGAGGTCCAGTCGTGCATCGC 204372 |||||| || |||| | | || |||| |||||||||| ||| || | | Sbjct 5784163 CTGTTGCGGACTCCGTGCTGCTTGA-TCTGCTCCTTCAGAGAGTCCCAATCCCAGAGGTC 5784105 Query 204373 ACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTT 204432 | |||| || || ||||||| ||| |||| | ||| || || ||| ||| ||||| Sbjct 5784104 AGTGGGCTTGACATCCCACATATCGTACTGGAGGATTCCCTGGGAGACAGGGGAGCCCTC 5784045 Query 204433 GTACGTCGGATAAGGCTG--ATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGA 204490 |||||| ||| ||| || | ||| | || |||||||| || || || ||| Sbjct 5784044 GTACGT-GGAGTAGG-TGCCCTGCTCCTGAGCAAGCTTGCAGGACATGGTCAGGGCAGCG 5783987 Query 204491 TAGTACATGGTCTCAAAGATCTG 204513 | ||| ||||||||||||||||| Sbjct 5783986 TGGTAGATGGTCTCAAAGATCTG 5783964 Score = 109 bits (120), Expect = 9e-19 Identities = 473/735 (64%), Gaps = 16/735 (2%) Strand=Plus/Minus Query 205060 CTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACA 205119 |||||| ||| |||||| ||| | || || || || ||| || || || || Sbjct 5783498 CTCGTACTTTTCGTACAGAGCCTCGAACTCGTCGCCATAGCAGTCGGCGAGACCAGGGCA 5783439 Query 205120 TTTTTTGGGACACATCAGAGACCACAT-CTGATCGTCTTTCACCCTCTCCATAAACAGGT 205178 | ||||| |||||||||| ||| | | || ||| || | || ||| || || | Sbjct 5783438 CTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCG-ACACGCTTCATGAAGAGAT 5783380 Query 205179 CGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCT 205238 || |||||| ||| || || ||||| || || | | | || | || |||||| Sbjct 5783379 CGGGGATCCAGAGGGCGAGGAATAGATCGCGAGCACGGACCTCCTCCTTGCCGTGGTTCT 5783320 Query 205239 TTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATT 205297 | || |||||| || || | | || |||||||||||||| | | | ||| | Sbjct 5783319 TGCGCAGGTCCAGG-AACTCGAAGACATCAGCGTGCCACGGCTCAAGGTAGATGGCGAAA 5783261 Query 205298 GCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGC 205357 ||||| || | |||||| ||||||||||| || ||| | | |||||| || ||| Sbjct 5783260 GCGCCGGGGCGCTTGTTGCCACCCTGGTCGACATAGCGGGCGGTGTTGTTGAACACACGC 5783201 Query 205358 AGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCC 205417 ||||| || | | |||||||| ||| ||||| |||| | ||| || || || Sbjct 5783200 AGCATGGGGATGATACCGTTGGAGGTGCCGTTGGTGCCGGCAATGTAAGAACCAGTGGCA 5783141 Query 205418 CTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCA-CTC 205476 | | | | || | | |||||| ||||||| ||||| ||| ||| || || Sbjct 5783140 CGGATGCGGTGGACGTTCAGGCCAATGCCGCCAGCCATCTTGGAAATCATGGCACAGGTC 5783081 Query 205477 TTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC-ACCAGATAGCACG 205535 ||| || ||| ||||||||| ||||| || ||| || |||| || || |||| | Sbjct 5783080 TTG-AGGGTGTCGTAGATGCCCTCGATGCTGTCCTCCTTCA-TGTCGACGAGGAAGCAGG 5783023 Query 205536 AAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAAGC 205595 ||| ||| | || | ||||||||| | ||| || ||||| ||| || ||||| Sbjct 5783022 AAGACAGTTGAGCCTGGGGGGTGCCCGCATTGAATAGGGTGGGCGAGGCATGAGTGAAGA 5782963 Query 205596 GCTTCTCGCTCAAACACC----TGTAGGTCTCCAGCACGCTCTCCAGATCGAAGCCGTGA 205651 || ||| ||| | |||||||||| | |||| ||| | ||| || Sbjct 5782962 ATTT---GCT-GGACATCAGGTTGTAGGTCTCGATGACGCGCTCGACATCATCACCCCAG 5782907 Query 205652 ATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTCCATCACCCTCTCGTTCACC 205711 || || | ||| | || ||| | | ||| ||||| | ||| | | | | | || | Sbjct 5782906 ATGCCGACGGCAACCCGCATAATCATGTGCTGAGGGCGCTCTGCGATCTTGCCATCCAAC 5782847 Query 205712 TTGAGCAGATAGGCTCTCTCTAGGGTGCGGATGGCAAAAAAGTTGAAGGTGTAGTCCCTA 205771 |||||||| || | || ||| ||||| || | | || | | | || || |||| | Sbjct 5782846 TTGAGCAGGTAAGATCGCTCCAGGGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCACGG 5782787 Query 205772 GAATAGTCGATGGCG 205786 |||| |||||||| Sbjct 5782786 TCATAGACGATGGCG 5782772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795155110545040