Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq3 149 7e-31 seq5 127 2e-24 seq6 125 8e-24 >seq3 Length=5970797 Score = 149 bits (164), Expect = 7e-31 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| ||| || || | || |||||| ||||| ||||||||||| || ||||| || Sbjct 630921 CGCAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCG 630980 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || ||||||||||||||||| |||| |||||||||||||| || | || ||||||| Sbjct 630981 TCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTG 631040 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| |||||| ||||| | | | |||||| ||| ||||| || | ||||| Sbjct 631041 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCCACCTCAAGGGTGATA 631100 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || ||||| || || || || ||||| ||||| Sbjct 631101 GTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 631135 >seq5 Length=5645814 Score = 127 bits (140), Expect = 2e-24 Identities = 139/182 (76%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||||| || ||||| | || || ||||||||||||||||| | Sbjct 3291299 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 3291358 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| |||||||||||||| || | || |||||||||| |||||| ||||| ||| | Sbjct 3291359 TCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTG 3291417 Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||| || ||||| || | ||||| || |||||||| || || || || Sbjct 3291418 TCAATGGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTAAGGGTCTTCACG 3291477 Query 46583 AA 46584 || Sbjct 3291478 AA 3291479 >seq6 Length=5170228 Score = 125 bits (138), Expect = 8e-24 Identities = 145/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||| ||| ||||| |||| ||||||||||| || ||||| Sbjct 5051877 CTCCTTCTGGATGTTGTAGTCGCTTAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 5051818 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||| |||| || | || |||||||||| |||||| ||||| ||| Sbjct 5051817 AATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 5051759 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || || || ||||| || | |||||||| ||||| ||||| || || | Sbjct 5051758 TGTCAATGGTATCCGAGGACTCCACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGA 5051699 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 5051698 CGAAGATCTGCAT 5051686 Score = 125 bits (138), Expect = 8e-24 Identities = 160/218 (73%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || | | ||| | |||||| || | || |||||| |||||||||||||||| Sbjct 5110411 TGCCACCACGCAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCGG 5110470 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || || |||||||||||||| |||| ||||||||||||| | Sbjct 5110471 AGAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCGGGAG 5110530 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 46543 | | | |||||||||| ||||||| ||||| ||| | | | || ||| || || Sbjct 5110531 GGATACCCTCCTTGTCCTGGATCTTCGACTTGA-CGTTGTCGATGGTATCGGAAGACTCG 5110589 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 || || | |||||||| || || ||||| || || || Sbjct 5110590 ACCTCGAGAGTGATGGTCTTTCCGGTCAGGGTCTTGAC 5110627 Score = 125 bits (138), Expect = 8e-24 Identities = 145/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||| ||| ||||| |||| ||||||||||| || ||||| Sbjct 5110733 CTCCTTCTGGATGTTGTAGTCGCTTAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 5110792 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||| |||| || | || |||||||||| |||||| ||||| ||| Sbjct 5110793 AATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 5110851 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || || || ||||| || | |||||||| ||||| ||||| || || | Sbjct 5110852 TGTCAATGGTATCCGAGGACTCCACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGA 5110911 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 5110912 CGAAGATCTGCAT 5110924 Score = 123 bits (136), Expect = 3e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| || ||||||| || |||||| ||||| ||||| || || || || || | Sbjct 5109968 ACGCAGGACGAGATGCAGAGTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTACGTCC 5110027 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || |||||||| || ||||| |||| |||||||||||| | || | | |||||| Sbjct 5110028 ATCTTCCAGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTT 5110087 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| ||||||| ||| | | | | ||||||| |||||| || |||| || || Sbjct 5110088 ATCCTGGATCTTCGACTTCACGTTATCGATCGTGTCGGACGATTCGACTTCCAGGGTAAT 5110147 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| || || || || |||||||| ||||| Sbjct 5110148 AGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 5110183 Score = 122 bits (134), Expect = 1e-22 Identities = 137/181 (76%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||||||||||||||| || ||||| | || || || |||||||||||||| Sbjct 5052162 CTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAA 5052103 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||||| || | | |||||||||| ||||||| ||||| ||| Sbjct 5052102 AATCAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTGA-CGT 5052044 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || ||| || || || || | |||||||| || || ||||| || || | Sbjct 5052043 TGTCGATGGTATCGGAAGACTCGACCTCGAGAGTGATGGTCTTTCCGGTCAGGGTCTTGA 5051984 Query 46581 C 46581 | Sbjct 5051983 C 5051983 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||||| ||| |||||| ||||| |||||||| || || ||||| | || || Sbjct 5110203 ACGAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 5110262 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 | ||||||||| || || || | |||||||||||||| || | || |||||||||| | Sbjct 5110263 AACTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGG 5110322 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| |||| | ||| | | | ||||| || || || |||| |||||||| || Sbjct 5110323 ATCTTGCTCTTCA-CGTTGTCGATTGTGTCAGAAGACTCGACTTCCAGAGTGATGGTCTT 5110381 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || || || || ||||| Sbjct 5110382 TCCGGTGAGGGTCTTGACGAAAATCTGCAT 5110411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238336410680