Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq5 140 3e-28 seq6 136 4e-27 seq3 131 2e-25 >seq5 Length=5645814 Score = 140 bits (154), Expect = 3e-28 Identities = 198/276 (72%), Gaps = 3/276 (1%) Strand=Plus/Plus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 |||||| || ||||| || || | || ||||| | ||||||||| ||| || || Sbjct 2728530 GTAGGTATCAATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAA 2728589 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 |||||| ||||| || |||||| | ||| || || ||||||||||| || || Sbjct 2728590 GCCGTAGAAGCAGCGAGCCTCGGGAATCTGGACCTCGCCGCTAAAACGCTCGACGAGGTT 2728649 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAA--ATGG 133344 |||||||| ||||||||| ||||||||| || ||||| | ||| |||||| || Sbjct 2728650 CTCGTTGACAATGCCGTCGGAGGCGGCGAAGAAAGCCAGGATGTGAGAGATGAAGTATTT 2728709 Query 133345 CGC-TCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 | | || | || | || | | ||| ||| | |||||||||||||| | |||||| Sbjct 2728710 CTCATCATCGTTGATCTTGTTGTTCCAATCGTGGAGATCCTTGGACAGGTCGATCTCCTC 2728769 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | | ||||| || || |||||||| || |||||||| Sbjct 2728770 GGCAGTCCAGAAGGAGGCCTCGGCCTTCTTGTACAT 2728805 Score = 114 bits (126), Expect = 1e-20 Identities = 136/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || |||||||| || |||||| |||| || ||| | | |||| | | Sbjct 3291479 TTCGTGAAGACCCTTACGGGCAAGACTATCACCCTCGAGGTGGAGTCTTCGGACACCATT 3291420 Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371 | |||| | || || |||| ||||| ||||| || ||| ||||||| ||||| || Sbjct 3291419 GACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCT 3291361 Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431 || | ||| ||||| ||||| || || | ||||||||| ||||||||||||||| || Sbjct 3291360 GATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAA 3291301 Query 38432 GG 38433 || Sbjct 3291300 GG 3291299 >seq6 Length=5170228 Score = 136 bits (150), Expect = 4e-27 Identities = 162/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| ||||||||| | || || ||| || | Sbjct 5051686 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTGGAGTCCTCG 5051745 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || || |||| ||||| ||||| |||||| |||| || Sbjct 5051746 GATACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGATCA 5051804 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||||| ||| || || ||||| || |||| |||||||| | ||||||||| Sbjct 5051805 GCAGCGTCTCATTTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTAAGCGACTACAA 5051864 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| | ||||| || |||| || ||| Sbjct 5051865 CATCCAGAAGGAGTCCACGCTCCACCTGGTTCTCCGT 5051901 Score = 136 bits (150), Expect = 4e-27 Identities = 162/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| ||||||||| | || || ||| || | Sbjct 5110924 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTGGAGTCCTCG 5110865 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || || |||| ||||| ||||| |||||| |||| || Sbjct 5110864 GATACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGATCA 5110806 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||||| ||| || || ||||| || |||| |||||||| | ||||||||| Sbjct 5110805 GCAGCGTCTCATTTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTAAGCGACTACAA 5110746 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| | ||||| || |||| || ||| Sbjct 5110745 CATCCAGAAGGAGTCCACGCTCCACCTGGTTCTCCGT 5110709 Score = 120 bits (132), Expect = 3e-22 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || || |||||||| | || |||||| | | Sbjct 5110411 ATGCAGATTTTCGTCAAGACCCTCACCGGAAAGACCATCACTCTGGAAGTCGAGTCTTCT 5110352 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | |||| | |||| || |||| ||||| ||||| || || |||||| Sbjct 5110351 GACACAATCGACAACG--TGAAGAGCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACC 5110294 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | |||||||| ||| |||| || | |||||||| ||||||| Sbjct 5110293 AGCAGCGCCTCATCTTTGCGGGCAAGCAGTTGGAAGATGGCCGCACCCTGTCTGACTACA 5110234 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| ||||| | || |||||| | || || ||| || | || || Sbjct 5110233 ACATCCAGAAGGAGTCTACCCTGCATCTCGTCCTTCGTCTGCGTGGTGG 5110185 Score = 105 bits (116), Expect = 7e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| ||||| || || ||| | || ||||| | || Sbjct 5110183 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACTATTACCCTGGAAGTCGAATCGTCC 5110124 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || || |||| || || ||||| ||||| | ||||| Sbjct 5110123 GACACGATCGATAACG-TGAAGTCGAAGATCCAGGATAAGGAGGGTATTCCTCCTGACCA 5110065 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| || || |||||||| || | || ||||| || ||||| Sbjct 5110064 GCAGCGCCTGATCTTCGCTGGAAAGCAGCTGGAAGATGGACGTACCCTGTCGGATTACAA 5110005 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||||| ||||| |||| |||||| | || |||||| | | ||||||| Sbjct 5110004 CATCCAGAAGGAGTCGACTCTGCATCTCGTCCTGCGTCTTCGTGGCGGCC 5109955 >seq3 Length=5970797 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || |||||||| || || |||||| | || || ||| | || Sbjct 631135 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCGTCC 631076 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| ||||| || ||| ||||||| Sbjct 631075 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 631016 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| ||||| || |||| ||||||||| |||||||||| Sbjct 631015 CAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTACAAC 630956 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| | || || || | |||||||| Sbjct 630955 ATCCAGAAGGAGTCCACCCTTCACCTCGTGCTGCG 630921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172743730560