Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq4 190 3e-43 seq7 84.2 3e-11 >seq4 Length=5903436 Score = 190 bits (210), Expect = 3e-43 Identities = 474/714 (66%), Gaps = 8/714 (1%) Strand=Plus/Plus Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081 |||||||| ||||| | || ||||| || || |||||||||||||| || | || || Sbjct 5424743 ATGGCGGCCTGGACGGCGGCACCGTAGGCAACAGCCTCATCGGGGTTGATGGACTTGTTG 5424802 Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141 | || || ||||| || || || | | | | || | ||||| || || || Sbjct 5424803 GGCTCCTTGCCGTTGAAGTAGTCGGTGATGAGCTTCTGCACACGGGGGATACGAGTGGAA 5424862 Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201 || ||||| | ||||| || | || | || || |||||||| | || || Sbjct 5424863 CCGCCGACAAGGACGATCTCGTGGACCTGGGACTTGTCGATCTTGGCATCGGTGAGGACG 5424922 Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261 ||||| || | || ||||||| |||| || || ||||| || || ||| Sbjct 5424923 CGGTCGACGGGCTGGATGGTGGAGCGGAACAGGTCCTGGCAGAGCTCCTCGAAGCGAGCA 5424982 Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321 ||||| || || || ||||| || | || ||| | | || || || || || | || Sbjct 5424983 CGGGTGATAGAAGTGTAGAAGTCGATACCCTCGAAGAGGGAGTCGATCTCGATCGAGGTC 5425042 Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381 || || | || || | || ||||| || ||||| || || || || | ||| || ||| Sbjct 5425043 TGAGCGGAAGAGGACAGAGTACGCTTGGCACGCTCGCAAGCGGTGCGGAGACGGCGCAGG 5425102 Query 7382 GCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG- 7440 || || | ||| | | || ||||| || || || || ||||||| |||||| Sbjct 5425103 GCGCGAGCGTTGGTGCTCAGGTCCTTCTTGTGCTTGCGCTTGAACTCTTGCACGAAGTGG 5425162 Query 7441 TCGA--AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCT 7498 | || ||| | | ||||| || || || |||| ||| ||||| || || || | Sbjct 5425163 TTGACAAGGCGGTTG---TCGAAGTCCTCGCCTCCCAGGTGAGTATCACCGGCAGTAGAC 5425219 Query 7499 TTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCC 7558 ||||| || || ||||| | || ||| | | || || ||||| || |||||||| || Sbjct 5425220 TTGACCTCGAAAATACCCTCCTCGATGGTGAGCAGAGAGACATCGAAAGTACCACCGCCA 5425279 Query 7559 AGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATA 7618 || || || ||||| ||||| ||| | || ||||| ||||||||||| || || Sbjct 5425280 AGATCGAAGATGAGGACGTTGCGCTCGCCCTCGACCTTCTTGTCGAGACCGTAGGCAATG 5425339 Query 7619 GCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCA-ATAGTTGCCGC 7677 || || || || || || || || ||||| || ||| ||||| ||| || | || Sbjct 5425340 GCAGCGGCGGTGGGCTCGTTGATGATACGGAGGACGTTGAGGCC-GCAGATGAGACCGGC 5425398 Query 7678 ATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGAC 7731 || || || || || || || || ||||| |||||||| ||||| || ||||| Sbjct 5425399 GTCCTTGGTGGCCTGACGCTGGGAGTCGTTGAAGTAGGCAGGGACAGTGACGAC 5425452 >seq7 Length=1566897 Score = 84.2 bits (92), Expect = 3e-11 Identities = 232/355 (65%), Gaps = 3/355 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||| | || || || ||||| || || || |||| || Sbjct 1176593 TCGAAATCCTCACCACCGAGCCTGGTGTCACCAGCGGTAGCGAGAACCTCGAAGACGCCG 1176652 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||| | | || ||||| || ||||||||||| || || | | || | Sbjct 1176653 GAGTCGATGGACAGGAGGGAGACATCGAAGGTACCACCACCAAGATCGTAGACGATGATC 1176712 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | ||| |||| | |||| || || ||||| || | || || || || || || Sbjct 1176713 TGGCGCTCGCCGTC---GGTCTTGTCAAGGCCGTAGGCCAGGGCGGCGGCGGTGGGCTCG 1176769 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | || || || ||| || || || || | | ||||| || || || || || Sbjct 1176770 TTGACGATGCGGAGGACGTTAAGACCGGCGATGATACCGGCATCCTTGGTGGCCTGGCGC 1176829 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || ||||| |||||||| || || || ||||| |||| ||||| ||||| ||||| Sbjct 1176830 TGGTTGTCGTTGAAGTAGGCGGGAACAGTGACGACGGCGTGAGTGACCTTCTTGCCGAGG 1176889 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 || || |||| || ||||| ||| ||| ||||| | || | ||| |||| Sbjct 1176890 TAGTTCTCGGCGACCTCCTTCATCTTGCCAAGGACCATGGCAGAGACCTCCTCAG 1176944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132728547560