Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq4 176 5e-39 seq6 107 2e-18 >seq4 Length=5903436 Score = 176 bits (194), Expect = 5e-39 Identities = 1099/1736 (63%), Gaps = 73/1736 (4%) Strand=Plus/Minus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATA-C 109558 ||||| |||||| ||||| |||||||| ||| || ||||| ||||| | | || | | Sbjct 5784503 GTTCAGCGACTGGGACTGGTCGATGAAGGCACCGCGGTCAGCGGCCATCTGAACGACAGC 5784444 Query 109559 ACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCA 109618 || | || ||| |||||||| |||||||||| ||||| || | || |||| Sbjct 5784443 ACGCTGGGA-AATCTCCCAGACGGTCTTGTACAGGGCCTTGACTTCGGCTGGGATGTTAG 5784385 Query 109619 CGATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGA---TCCTTCATCTCTTTCGACC 109675 |||||| |||| ||||| || | |||| | | |||||| | | |||| Sbjct 5784384 GGATGTTCTGAACGGAGCCGTT---CTCGGCGATGATACGGTTCTTCATGGCATCAGACC 5784328 Query 109676 AGAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTG---TTGACCACGACAAATTCAC 109732 ||||||| | | | || | ||| || || | ||||| || ||||| | Sbjct 5784327 AGAGACCCA---TGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACCTGGAATTCGC 5784271 Query 109733 CAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGC 109792 ||||||| ||| || |||||||||| | ||||| || ||||| || || ||||||| Sbjct 5784270 CAGCAAGCACGCGGCGCTGGTAGATGTTCGAGGTGTAAGGCTCGAAGCATTCGTTGTTGC 5784211 Query 109793 CTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGAC 109852 | ||||| || | |||||||| ||||||||||| || | ||| | ||||| |||| | Sbjct 5784210 CAAGGATCTGAGATGTGGAAGCAGTGGGCATGGGGGCAACGAGCAAGCTGTTGCGGACTC 5784151 Query 109853 CCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCT 109912 | | | ||| | | |||| || | ||||||||| | | || | | || Sbjct 5784150 CGTGCTGCTTGATCTGCTCCTTCAGAGAGTCCCAATCCCAGAGGTCA------GTGGGCT 5784097 Query 109913 CACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCT 109972 ||||||||||||| || || | |||| | |||| || |||| | | | Sbjct 5784096 TGACATCCCACATATCGTACTGGAGGATTCCCTGGGAGACAGGGGAGCCCTCGTACGTGG 5784037 Query 109973 CGTACGACCCCTCAACCTCGGCCAACTCGGATGA-AGCCTCTAGTGCCGCATGATACATA 110031 ||| | |||| ||| || | || | | || | || || || || || || || Sbjct 5784036 AGTAGGTGCCCTGCTCCTGAGCAAGCTTGCAGGACATGGTC-AGGGCAGCGTGGTAGATG 5783978 Query 110032 GTCTCAAAAATATGAGCATTCATGAG---GCGAGACTCTTCACAGTCGAAGGGAA----G 110084 |||||||| || || || |||| || | ||| | | ||||| || | | Sbjct 5783977 GTCTCAAAGATCTG---CTTGTTGAGCTCACGGGCCTCGGGAGACTCGAAAGGCATGCGG 5783921 Query 110085 ACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTT 110144 | | | | || | || || |||||||||||||| ||||| ||||| ||||| Sbjct 5783920 AGGGCGAGG----AAGGCGTCGGCCAGACCCTGAACACCCAGACCGATGGGACGATGGCG 5783865 Query 110145 CATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAG 110204 |||||| | || || | |||||||| ||||| |||||||| | || || Sbjct 5783864 CATGTTGCTGTTGCGGGCCTCCTGAACGGGGTAGTAGTTGACGTCGATGATCTTGTTCAG 5783805 Query 110205 ATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTC 110264 ||| || || || |||| || || || || | | | ||| | | | ||| Sbjct 5783804 GTTCCTCACAACGACCTGTGTGACCTCGTGCAGCTTCTTGAAGTCGTA-GACACC--CTC 5783748 Query 110265 CTTATTG---ACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTC 110321 || | | || | |||||| || | || ||||| ||||| |||| ||| || Sbjct 5783747 GTTGTAGTCCACGAAAGAGGGGAGCGCCAAGGAGGCAAGGTTGCAGACAGCGACCTCATC 5783688 Query 110322 TTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTT 110381 | | ||| || | || ||||| |||| |||||| || ||| || | ||| Sbjct 5783687 AGGGGCACAGTACTCGATGATCTCCGTGCACAGGTTGGAGCTGCGGATGGTGCCGAGGTT 5783628 Query 110382 CTTCTGATTCGATTTGGAGTT-GCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTT 110440 |||||| || || ||| || || ||||| || |||||| | ||| | ||||| | Sbjct 5783627 CTTCTGGTTGCTCTTCCTGTTGGCGTG-GTCCTTGTAAAGCATGAAGGGGTTGCCAGTCT 5783569 Query 110441 CCGTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAG--TTGCGTTAG 110497 | ||||| | || ||| ||||| | ||| | | || | ||| || | || || | Sbjct 5783568 CGGTCTGGGCCTCGAGGATGGCATACCAGAGCTTCTG-GGCCCTGATGGTCTTCCG--AC 5783512 Query 110498 CGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAG 110557 | || ||| ||||||||| ||||| |||| || || | || || || | Sbjct 5783511 CCTTGCCCGCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCGTCGCCATAGCAGTCGG 5783452 Query 110558 AAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCT 110617 ||||| || || ||| || | || | ||| | || || ||| || | || Sbjct 5783451 CGAGACCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCGACACGCT 5783392 Query 110618 TCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCAT 110677 ||||||| || || || ||||| | || ||| || || || ||| |||| || | Sbjct 5783391 TCATGAAGAGATCGGGGATCCAGAGGGCGAGGAATAGATCGCGAGCACGGACCTCCTCCT 5783332 Query 110678 CACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGAT 110737 || ||||| ||| || |||| || || | || ||| | |||||| || || || | Sbjct 5783331 TGCCGTGGTTCTTGCGCAGGTCCAGGAACTCGAAGACATCAGCGTGCCACGGCTCAAGGT 5783272 Query 110738 A------GACAGCGATGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGG 110791 | || |||| || | ||| | | || |||||| |||||||| || ||| Sbjct 5783271 AGATGGCGAAAGCGCCGGGGCGCTT--GTTG-CCACCCTGGTCGACATAGCGGGCGGTGT 5783215 Query 110792 CATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTC 110851 ||||| || | ||||| || || || || | ||| || || || || ||| Sbjct 5783214 TGTTGAACACACGCAGCATGGGGATGATACCGTTGGAGGTGCCGTTGGTGCCGGCAATGT 5783155 Query 110852 TGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAA 110911 || | ||||||| ||| ||||| | || ||||| || || ||| ||| || Sbjct 5783154 AAGAACCAGTGGCACGGATGCGGTGGACGTTCAGGCCAATGCCGCCAGCCATCTTGGAAA 5783095 Query 110912 TTTGTGCACA-CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCA 110970 | ||||| ||| |||| || | || || || || || || |||| || | Sbjct 5783094 TCATGGCACAGGTCT-TGAGGGTGTCGTAGATGCCCTCGATGCTGTCCTCCTTCATGTCG 5783036 Query 110971 ATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTC 111030 | || ||||| ||||||| |||| | || || ||||||||||| || || || | Sbjct 5783035 ACGAGGAAGCAGGAAGACAGTTGAGCCTGGGGGGTGCCCGCATTGAATAGGGTGGGCGAG 5782976 Query 111031 GCATGAATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACAT 111088 |||||| ||| ||| ||| ||||||| |||||| || |||| || |||| Sbjct 5782975 GCATGAGTGA--AGAATTTGCTGGACATCAGGTTGTAGGTCTCGATGACGCGCTCGACAT 5782918 Query 111089 CTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAG---GCGTTTCGATTA 111145 | | ||| || || | |||||| ||||| | ||| | |||| || | |||| Sbjct 5782917 CATCACCCCAGATGCCGACGGCAACCCGCATAATCATGTGCTGAGGGCGCTCTGCGAT-- 5782860 Query 111146 GCTTTCCAT-CAACACGCTGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTA 111200 ||| |||| |||| | | |||||| ||| |||||||||| || ||||| Sbjct 5782859 -CTTGCCATCCAACTTG-AGCAGGTAAGATCGCTCCAGGGTCTTGAAGCCGAAGTA 5782806 >seq6 Length=5170228 Score = 107 bits (118), Expect = 2e-18 Identities = 282/421 (67%), Gaps = 21/421 (5%) Strand=Plus/Plus Query 11588 TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGG 11647 ||| |||||||||||| || || || | |||||||| ||| || ||||| |||||| Sbjct 4653664 TGTTGAAACCGTCCATCTCCGTCAGGATCTGGTTGAGGGTCGACTCGCGCTCGTCGTTGC 4653723 Query 11648 AG---GGCATA---CCA-CCTGCC--GAACGCTTCTTACCGACAGCGTCAATCTCATCGA 11698 | ||| | ||| |||| | || || || | ||||| ||||| |||| Sbjct 4653724 CGCCGGGCCTGTTGCCATCCTGTCTCGATCGG------CCAATGGCGTCGATCTCGTCGA 4653777 Query 11699 TGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCG 11758 |||| | ||| || || ||| || || | || | ||||| |||||| | Sbjct 4653778 TGAAGATGATGCAGGGGGCGTTCTTGCGCGCAGAGGCAAACAAGTCACGCACACGCGAGG 4653837 Query 11759 CTCCAACACCTACGAACATCTCAACGAAGTTTGCG--GCAGAACACTGAATGAAGGGAAC 11816 || ||||| ||||||||||| ||||| | | | || || | ||||| |||||| || Sbjct 4653838 AACCGACACCGACGAACATCTCGACGAACTCGGAGCCGCTGA-CGCTGAA-GAAGGGCAC 4653895 Query 11817 ATTAGACTCACCAGC-GATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAG 11875 | |||||| || || | || || | || || || |||||||| ||||| || | |||| Sbjct 4653896 ACCAGACTCGCCGGCCGTTGCCTTG-GCCAGAAGCGTCTTACCTGTACCGGGAGGTCCAG 4653954 Query 11876 CGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGA 11935 || | |||||| || || ||||||||||| | | ||||||| ||| |||| | Sbjct 4653955 ACAGGATGGCGCCGCGAGGAATCTTGGCACCGAGGCGCTCGAAGCGCTCCGGCGTCTTCA 4654014 Query 11936 GGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACCCTCAACATCGGTGA 11995 ||||| || | |||| | || ||||||| ||| || ||| | || || | || Sbjct 4654015 GGAAGCTGACGAACTCCATGATCTCGGCCTTGGCCTCGTCCATGCCCGCCACGTCCGAGA 4654074 Query 11996 A 11996 | Sbjct 4654075 A 4654075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975933740200