Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq6 98.7 6e-16 seq3 86.0 4e-12 >seq6 Length=5170228 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || ||||| ||| | ||| |||| |||||||| ||||| || || Sbjct 5109993 TCCTTCTGGATGTTGTAATCCGACAGGGTACGTCCATCTTCCAGCTGCTTTCCAGCGAAG 5110052 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | |||||||| || |||||| || ||| Sbjct 5110053 ATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTATCCTGGATCTTCGACTTCACGTTA 5110112 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | || || || | ||| || || || || ||||| ||||| ||| Sbjct 5110113 TCGATCGTGTCGGACGATTCGACTTCCAGGGTAATAGTCTTGCCGGTGAGGGTCTTGACA 5110172 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 5110173 AAGATCTGCATA 5110184 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || ||| | || |||| |||| ||| || || ||||| Sbjct 5110221 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAACTGCTTGCCCGCAAAG 5110280 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| || ||| Sbjct 5110281 ATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTCACGTTG 5110340 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | ||| || || | || ||||| ||||| ||||| ||||| || Sbjct 5110341 TCGATTGTGTCAGAAGACTCGACTTCCAGAGTGATGGTCTTTCCGGTGAGGGTCTTGACG 5110400 Query 34971 AAGATCTGCAT 34981 || |||||||| Sbjct 5110401 AAAATCTGCAT 5110411 >seq3 Length=5970797 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/208 (70%), Gaps = 8/208 (4%) Strand=Plus/Plus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| || ||||| ||||| ||||| || ||| | || | || || ||||| Sbjct 630932 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTG 630991 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || ||||| || || || || |||||||| | || | ||||||||||| ||||| Sbjct 630992 CTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTT 631051 Query 34898 CTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953 ||||| || | ||||| || | ||| || || | ||| || || || | Sbjct 631052 GGACTTGAC--AT--TGTCGATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTAC 631107 Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||||| ||||| || ||||||||||| Sbjct 631108 CCGTGAGGGTCTTGACGAAGATCTGCAT 631135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633564391752