Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq2 98.7 8e-16 >seq2 Length=7157451 Score = 98.7 bits (108), Expect = 8e-16 Identities = 253/384 (66%), Gaps = 16/384 (4%) Strand=Plus/Plus Query 30008 TGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGA 30067 ||||||| ||||| || ||||| | || || ||||||||| ||| | | | || Sbjct 6949594 TGTGGCATGGAGGCAGGGCCATCTGCTTCAGGTGGGCGGGGTTCCATGCGGAGAGCAGGA 6949653 Query 30068 TGCGCCTGTCTTCTGGGTTGTTCCTGAT------GAGGTCCACGGCGTTTTGCAGCTGAT 30121 |||||| ||| | || ||||| | | || | || ||||| ||||| | Sbjct 6949654 TGCGCCGGTCGTACGGCGTGTTCTTCAGCTTGTAGATGACCTCGGCG------AGCTGGT 6949707 Query 30122 CCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCC 30181 | || ||| ||||| ||| || | | | ||| ||| || || |||||||||| || Sbjct 6949708 CGACTCCCTGCCCCGTGTAATCGGTCTTGGCGTCGACGTATTCGGCGCCGAAATGCCGCC 6949767 Query 30182 ACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGT 30241 ||||||| ||||| || || || || || ||| | || | ||| || ||| ||| Sbjct 6949768 ACTGGAAGCCGTATACGGGGCCGAGATCGCCCACCTCGCGGTGGGAGAGGCCGACGCTGT 6949827 Query 30242 CCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC--CTTCTCGGAGAGCTC 30299 | | || || | || |||||| ||||||||||||| || || |||| | ||| | | Sbjct 6949828 CGAGGAACTCGCGCGACCCGTTGCCGTCCCAGATCTTGACGCCGGCTTCGCTGAGTG--C 6949885 Query 30300 TTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAA 30359 |||| ||| ||| || |||||| |||||||| | | ||||| | || Sbjct 6949886 CAGGGAGGACGTGTTCCCCTCGATGAACCAGAGCAGCTCGGCGATAACGGCGCGCAGGAA 6949945 Query 30360 GACCCTCTTGGTCGTGAGGAGGGG 30383 || | || ||||| |||||||| Sbjct 6949946 CACGCGTTTTGTCGTCAGGAGGGG 6949969 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 29775 TCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGC 29834 ||| || || ||||| |||||| ||||||| | || | ||| || | || || || || Sbjct 6949313 TCTCGGTTCTCTCTCCAGCTGAATCTTCAGGGCGTCGATGTGGTCAACATACACATGCGC 6949372 Query 29835 GTCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGT 29893 ||| |||| | ||| | || || |||||| | || || | | || ||||||| Sbjct 6949373 GTCGCCCATGACGTGCGTCAGGCT-TCCCGGAACCAGGTCGCATGCTCGCGCAATCATGT 6949431 Query 29894 ACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACC 29953 |||||||| | ||||||||| || || || || || || || |||||||| | |||| Sbjct 6949432 GAGTGAGGAGGGCGTAGCTGGCAATATTGAACGGCACGCCCAGGCCCATGTCGCAGGACC 6949491 Query 29954 TCTGGTAGAGCTGACA 29969 ||||||| | ||| || Sbjct 6949492 TCTGGTACAACTGGCA 6949507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617555179757