Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq6 91.5 1e-13 seq3 91.5 1e-13 >seq6 Length=5170228 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| || |||||| ||| || || || ||||| || ||| | ||| |||| || Sbjct 5051894 ACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTTAGGGTGCGACCGTCCTCG 5051835 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | ||||||||| || || || || ||||| ||||| | ||||| |||||||||||| Sbjct 5051834 AGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGG 5051775 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || || | | | || || | ||||||||| | || || || || Sbjct 5051774 ATCTTGGACTTGACGTTGTCAATGGTATCCGAGGACTCCACCTCAAGGGTGATGGTCTTG 5051715 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 || |||| ||| || || || |||||||| ||| Sbjct 5051714 CCAGTCAGAGTCTTGACGAAGATCTGCATGGTG 5051682 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| || |||||| ||| || || || ||||| || ||| | ||| |||| || Sbjct 5110716 ACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTTAGGGTGCGACCGTCCTCG 5110775 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | ||||||||| || || || || ||||| ||||| | ||||| |||||||||||| Sbjct 5110776 AGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGG 5110835 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || || | | | || || | ||||||||| | || || || || Sbjct 5110836 ATCTTGGACTTGACGTTGTCAATGGTATCCGAGGACTCCACCTCAAGGGTGATGGTCTTG 5110895 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 || |||| ||| || || || |||||||| ||| Sbjct 5110896 CCAGTCAGAGTCTTGACGAAGATCTGCATGGTG 5110928 >seq3 Length=5970797 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 48538 CGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAG 48597 |||| || | || |||| ||| | || || ||| ||| || || || ||||| || | Sbjct 630907 CGCCACCACGGAGGCGCAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 630966 Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657 | || | || |||| || | |||||| ||||| || ||||| ||||| || || | || Sbjct 630967 AGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGG 631026 Query 48658 GAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCA 48717 | | |||||||||||| ||||| || ||| | | | || |||| ||||| Sbjct 631027 GGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCCA 631086 Query 48718 CCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 |||| | || || || || ||||| | || || || || |||||||| ||| Sbjct 631087 CCTCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCATGGTG 631139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937558215907