Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq4 423 4e-113 seq5 123 5e-23 >seq4 Length=5903436 Score = 423 bits (468), Expect = 4e-113 Identities = 1149/1739 (66%), Gaps = 55/1739 (3%) Strand=Plus/Minus Query 212687 CAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTC 212746 || ||| | |||||| ||||| |||||| ||||| | | | |||||||||||| | Sbjct 5784512 CATATGGATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCGCGGTCAGCGGCCATCTG 5784453 Query 212747 TATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGG 212806 | || | | | |||||| | |||||| ||||||||| | | | |||| || |||| Sbjct 5784452 AACGACAGCACGCTGGGAAATCTCCCAGACGGTCTTGTACAGGGCCTTGACTTCGGCTGG 5784393 Query 212807 GAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGTCAGCTGCAGGCGCATGTC 212863 || | ||||||||||| || || || | | ||| | | | | |||| | Sbjct 5784392 GATGTTAGGGATGTTCTGAACGGAGCCGTTCTCGGCGATGATACGGTTCTT---CATGGC 5784336 Query 212864 CTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAA 212923 || |||||| ||| || | ||| ||||| ||| |||||||| | |||||| Sbjct 5784335 ATCAGACCAGAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACCTGGAA 5784276 Query 212924 GTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTT 212983 || || | ||||| | | |||||| | ||| || ||||| ||||||| || ||||| Sbjct 5784275 TTCGCCAGCAAGCACGCGGCGCTGGTAGATGTTCGAGGTGTAAGGCTCGAAGCATTCGTT 5784216 Query 212984 GTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCT 213043 ||| || || ||||| | ||| || ||||||||||| || || || | ||||| | Sbjct 5784215 GTTGCCAAGGATCTGAGATGTGGAAGCAGTGGGCATGGGGGCAACGAGCAAGCTGTTGCG 5784156 Query 213044 CACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTC 213103 |||||||||| ||| | | || || | ||||||| | ||||| |||| Sbjct 5784155 GACTCCGTGCTGCTTGATCTG-CTCCT----TCAGAG-AGTCCCAA-TCCCAGA--GGTC 5784105 Query 213104 CTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTG 213163 | ||| || | |||||| || |||| | ||| || | | || ||| ||||| Sbjct 5784104 AGTGGGCTTGACATCCCACATATCGTACTGGAGGATTCCCTGGGAGACAGGGGAGCCCTC 5784045 Query 213164 GTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTA 213223 ||| | |||||||| ||| ||||||| || |||| ||||||| ||||||||||| Sbjct 5784044 GTACGTGGAGTAGGTGCCCTGCTCCTGAGCAAGCTTGCAGGACATGGTCAGGGCAGCGTG 5783985 Query 213224 GTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCAT 213283 ||||||||| ||||| |||| | ||||||||| |||||| || ||| ||| ||||| Sbjct 5783984 GTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCACGGGCCTCGGGAGACTCGAAAGGCAT 5783925 Query 213284 CATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCT 213343 | | |||| | || ||||| ||||| || || | |||||||| | || | Sbjct 5783924 GCGGAGGGCGAGGAAGGCGTCGGCCAGACCCTGAACACCCAGACCGATGGGACGATGGCG 5783865 Query 213344 CAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAG 213403 || ||| ||| | ||||| | |||||| ||||| ||||||||||||||| || Sbjct 5783864 CATGTTGCTGTTGCGGGCCTCCTGAACGGGGTAGTAGTTGACGTCGATGATCTTGTTCAG 5783805 Query 213404 GTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCC 213463 ||| | | || | ||||| | | ||| | | ||||| ||||| | || Sbjct 5783804 GTTCCTCACAACGACCTGTGTGACCTCGTGCAGCTTC------TTGAAGTCGTAGACACC 5783751 Query 213464 ------GTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTC 213517 || | ||| || || || || | | ||| |||||||| || || ||||| Sbjct 5783750 CTCGTTGTAGTCCACGAAAGAGGGGAGCGCCAAGGAGGCAAGGTTGCAGACAGCGACCTC 5783691 Query 213518 CTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAG 213577 | || | | |||||| |||||||| |||||||||||| || ||||||||||| || Sbjct 5783690 ATCAGGGGCACAGTACTCGATGATCTCCGTGCACAGGTTGGAGCTGCGGATGGTGCCGAG 5783631 Query 213578 GTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGT 213637 ||||| ||||| ||| |||||| |||||||| |||||| ||||| || || Sbjct 5783630 GTTCTTCTGGTTGCTCTTCCTGTTGGCGTGGTCCTTGTAAAGCATGAAGGGGTTGCCAGT 5783571 Query 213638 CTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACCTGGCCTTGACCACCCGCCTG 213695 ||| ||||| | | || | |||| |||||| | | |||| ||| | || | Sbjct 5783570 CTCGGTCTGGGCCTCGAGGA--TGGCATACCAGAGCTTCTGGGCCCTGATGGTCTTCC-G 5783514 Query 213696 ACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACC 213755 || | | || | |||||||| |||||| || | | ||| |||| ||| || Sbjct 5783513 ACCCTTGCCCGCCT--TCTCGTACTTTTCGTACAGAGCCTCGAACTCGTCGCCATAGCAG 5783456 Query 213756 CTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCG-TCATCTCTGAC 213814 | | || || || || ||| ||||| || ||||||| ||| || |||| ||| Sbjct 5783455 TCGGCGAGACCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTC-GAC 5783397 Query 213815 TCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTC 213874 | || |||||| || || |||| ||| || ||| ||| || || | | | ||| Sbjct 5783396 ACGCTTCATGAAGAGATCGGGGATCCAGAGGGCGAGGAATAGATCGCGAGCACGGACCTC 5783337 Query 213875 GTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTC 213934 ||| || ||| |||||||| || || || || |||| || |||||||||||||| Sbjct 5783336 CTCCTTGCCGTGGTTCTTGCGCAGGTCCAGGAACTCGAAGACATCAGCGTGCCACGGCTC 5783277 Query 213935 CATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCAC 213991 | ||||||||| || ||||| | || | ||||| |||||||| || | ||| Sbjct 5783276 AAGGTAGATGGCGAAAGCGCCGGGGCGCTTGTTGCCACCCTGGTCGACATAGCGGGCGGT 5783217 Query 213992 CATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTAT 214051 ||||||| | ||||| | ||| | | |||||||| |||||||| || || || Sbjct 5783216 GTTGTTGAACACACGCAGCATGGGGATGATACCGTTGGAGGTGCCGTTGGTGCCGGCAAT 5783157 Query 214052 ATACGAGCCGGAGGCCCTCAGGTTGCTCATGGA----GAGCCCTATGCCACCGGCGTACT 214107 || || || | ||| | || ||| |||| || || ||||| || || || Sbjct 5783156 GTAAGAACCAGTGGCAC---GGATGC-GGTGGACGTTCAGGCCAATGCCGCCAGCCATCT 5783101 Query 214108 TGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGA 214167 |||| |||||||| ||| | | | || || |||||| | |||||||| || | | Sbjct 5783100 TGGAAATCATGGCACAGGTCTTGAGGGTGTCGTAGATGCCCTCGATGCTGTCCTCCTTCA 5783041 Query 214168 GGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGG 214227 || | | ||||||| || || || | | || | ||| | ||||| || |||| Sbjct 5783040 TGTCGACGAGGAAGCAGGAAGACAGTTGAGCCTGGGGGGTGCCCGCATTGAATAGGGTGG 5782981 Query 214228 GGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGA 214287 | |||||| | | || ||| | || | || |||||||||| | ||| || Sbjct 5782980 GCGAGGCATGAGTGAAGAATTTGCTGGACATCAGGTTGTAGGTCTCGATGACGCGCTCGA 5782921 Query 214288 TGTCGTGCTTGTGGATCTGTAGAGCGCA--CCTCATCAGCATGTGCTGGGGCCTCTCTAT 214345 || | || || || ||| || ||| | ||||||||| || | ||| | Sbjct 5782920 CATCATCACCCCAGA--TGCCGACGGCAACCCGCATAATCATGTGCTGAGGGCGCTC--T 5782865 Query 214346 GGGTCCTTTGGGGCC--CTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402 | | ||| || |||||||||||| || |||||||| |||||||| || ||||| Sbjct 5782864 GCGATCTTGCCATCCAACTTGAGCAGGTAAGATCGCTCCAGGGTCTTGAAGCCGAAGTA 5782806 >seq5 Length=5645814 Score = 123 bits (136), Expect = 5e-23 Identities = 334/505 (66%), Gaps = 11/505 (2%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| | || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 2727911 CTGGTAGTCGGCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTC 2727970 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| ||||||||||| || || ||| | || ||| | | || | Sbjct 2727971 CATGAAGTCGAAGGGGTTGGTGACCTTGTAGACCT-TCTCGTTGCCGAGGGCGACGAGGA 2728029 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | | || || || |||| ||||| | |||||| || ||||||||| | || Sbjct 2728030 GACGGTCGGCAACAAACTCAATGTACTGCTTCATGAGAGTAGAGTTCATGCCGAGCAGAC 2728089 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||| | ||| | ||||| ||||||| ||| || | || || || | | || | Sbjct 2728090 CGCAGGGGAGAGCTTCGGTGAGGAACTCCTGCTCGATTTTGACAGCATCGACGATGATGT 2728149 Query 48078 GCTTAACG--CGGGACTCTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGG 48134 || | | | || || | |||||| ||||| || |||||| ||||| Sbjct 2728150 CCTGGATCATCTGTTTGCTCGGGCGCTTGTTG---AGGTG---GGAGAAGAGCAGGCAGG 2728203 Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194 | ||||| |||| | || ||||| || ||||||| ||||||| ||| || || | Sbjct 2728204 CGAAGTCAGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAAAAGGTCAGGCCGG 2728263 Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254 |||| | || | || ||||||||||| || | ||| || | || ||||||||| | Sbjct 2728264 GCATCAGGCCGCGCTTCTTGAGCCAGAAGATGGACGCAAAGGCACCGCTGAAGAAGATAC 2728323 Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCC 48314 |||| || || ||||| ||| || | | |||| | || | |||||| | ||||| Sbjct 2728324 CCTCAACGGCAGCGAAAGCGACCAGACGCGACGCGAAGGTAGACTCCTTGTCGGTGATCC 2728383 Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTT 48339 || || ||||| || |||||||| Sbjct 2728384 AGCGAATAGCCCAATCGGCCTTCTT 2728408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532695202560