Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq4 320 3e-82 seq5 178 2e-39 >seq4 Length=5903436 Score = 320 bits (354), Expect = 3e-82 Identities = 851/1280 (66%), Gaps = 49/1280 (4%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGG-CCTCGGG 221475 ||||||||||||||||||||||||||||||||| ||||||||| ||| || ||||||| Sbjct 5783998 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAG-CTCACGGGCCTCGGG 5783940 Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535 ||| ||| ||||| || || | ||| |||||||||| ||||| || || | ||| Sbjct 5783939 AGACTCGAAAGGCATGCGGAGGGCGAGGAAGGCGTCGGCCAGACCCTGAACACCCAGACC 5783880 Query 221536 GATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACG 221593 |||||| | || | | ||||| | |||| | || ||| ||||| || |||||||| Sbjct 5783879 GATGGGACGATGGCGCATGTTGCTGTTGCGGGC-CTCCTGA-ACGGGGTAGTAGTTGACG 5783822 Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653 ||||| | ||||| |||||| | ||| | |||||| |||||||| Sbjct 5783821 TCGATGATCTTGTTCAGGTTCCTCACAACGACCTGTGTGACCTCGTGCAGCTTCT----- 5783767 Query 221654 TTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTG 221713 |||| | | | || ||| || | ||||| |||| | || || | | | Sbjct 5783766 -TGAAGTCGTAGACACCCTCGTTGTAG------TCCACGAAAGAGGGGAGCGCCAAGGAG 5783714 Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGG 221773 || ||||| || || || ||||| || | |||| |||||||| || || ||| Sbjct 5783713 GCAAGGTTGCAGACAGCGACCTCATCAGGGGCACAGTACTCGATGATCTCCGTGCACAGG 5783654 Query 221774 TTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTG 221833 ||| || |||||| || |||| || || || ||| | ||||| ||||||| Sbjct 5783653 TTGGAGCTGCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTCCTGTTGGCGTGGTCCTTG 5783594 Query 221834 TAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCT 221893 || ||||| ||||| ||||||||| ||| ||| | || || | |||||| | | Sbjct 5783593 TAAAGCATGAAGGGGTTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCAGAGCT-T 5783535 Query 221894 CTGG-CGCTCACCGTCCTC------TTGACTGCACCCTCGGTCTTTTCATACCCGGTATA 221946 |||| | || | ||| || ||| | || |||| |||||| ||| | Sbjct 5783534 CTGGGCCCTGATGGTCTTCCGACCCTTGCCCGCCTTCTCGTACTTTTCGTAC-------A 5783482 Query 221947 GAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACAT 222006 |||| | | |||| || || || ||| | || || || ||| | ||| ||||| Sbjct 5783481 GAGCCT--CGAACTCGTCGCCATAGCAGTCGGCGAGACCAGGGCACTCGTTGGGGCACAT 5783424 Query 222007 CAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGC 222066 |||| |||||| ||| | | ||| | || ||||||||| || |||||||| || || Sbjct 5783423 CAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGGATCCAGAGGGC 5783364 Query 222067 CTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAA 222126 | || ||||| | | || ||||||| ||||| ||| || | ||| |||| || Sbjct 5783363 GAGGAATAGATCGCGAGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCCAGGAA 5783304 Query 222127 CTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTT 222186 ||| || | ||||||||||||||||| || |||| ||| | ||||||||| |||||||| Sbjct 5783303 CTCGAAGACATCAGCGTGCCACGGCTCAAGGTAGATGGCGAAAGCGCCGGGGCGCTTGTT 5783244 Query 222187 GCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTC 222245 ||||||||| || | ||| | | | |||||| | || || | || | | | Sbjct 5783243 GCCACCCTGGTCGA-CATAGCGGGCGGTGTTGTTGAACACACGCAGCATGGGGATGATAC 5783185 Query 222246 CGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC--TGG- 222302 ||||||| ||||||||||| |||||| | ||| ||| | || | | ||| Sbjct 5783184 CGTTGGAGGTGCCGTTGGTGCCGGCAATGTAAGAACCAGTGGCAC---GGATGCGGTGGA 5783128 Query 222303 CAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCA 222362 | || ||| || || || || || || |||||||| ||| ||||||| ||||| Sbjct 5783127 CGTTCAGGCCAATGCCGCCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTGTCGT 5783068 Query 222363 TGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATT 222422 ||||||||| || ||||||||| | || | || || || || |||| |||| | Sbjct 5783067 AGATGCCCTCGATGCTGTCCTCCTTCATGTCGACGAGGAAGCAGGAAGACAGTTGAGCCT 5783008 Query 222423 TGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCA 222482 || || | || || || || ||||| ||| || || ||| | || ||||||| Sbjct 5783007 GGGGGGTGCCCGCATTGAATAGGGTGGGCGAGGCATGAGTGAAGAATTTGCTGGACATCA 5782948 Query 222483 GATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCGCATCTC 222541 | | ||| ||||| | ||| | ||| | || ||| || | | | ||| | | Sbjct 5782947 GGTTGTAGGTCTCGATGACGCGCTCGACATCATCACCCCAGATGCCG-ACGGCAACCCGC 5782889 Query 222542 ATGTACATGTACTG-GGGC-CTCTCCACAGGACCCTTGGAGCTGGAGAGCAGGTACGATT 222599 || ||||| ||| |||| |||| | || | | || ||||||||| ||| Sbjct 5782888 ATAATCATGTGCTGAGGGCGCTCTGCGATCTTGCCATCCAACT--TGAGCAGGTAAGATC 5782831 Query 222600 TTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGG 222659 ||||| |||||||| || ||||| | | || ||||| | | | | || | ||||| Sbjct 5782830 GCTCCAGGGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCACGGTCATAGACGATGGCGG 5782771 Query 222660 CGTCCAGCTCCGACTTGTGC 222679 ||| || ||| ||||||| Sbjct 5782770 AGTCGAGTTCCTCCTTGTGC 5782751 Score = 95.1 bits (104), Expect = 2e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || || ||||| || || | ||||| | | |||||| | ||| || ||| | || Sbjct 5784290 GTTGACAACCTGGAATTCGCCAGCAAGCACGCGGCGCTGGTAGATGTTCGAGGTGTAAGG 5784231 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 |||| || ||||||||||| |||||||||| ||| || ||||||||||| || || Sbjct 5784230 CTCGAAGCATTCGTTGTTGCCAAGGATCTGAGATGTGGAAGCAGTGGGCATGGGGGCAAC 5784171 Query 221236 CAGCAGACTGTTGCGCAGTCCG 221257 |||| |||||||| | |||| Sbjct 5784170 GAGCAAGCTGTTGCGGACTCCG 5784149 >seq5 Length=5645814 Score = 178 bits (196), Expect = 2e-39 Identities = 309/450 (69%), Gaps = 15/450 (3%) Strand=Plus/Minus Query 25878 GCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCAT 25937 ||| ||||| || || ||||| || ||||| ||||| ||||||||| | |||||| |||| Sbjct 2728352 GCGTCTGGTCGCTTTCGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCGTCCAT 2728293 Query 25938 CTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAG 25997 ||||||||||||| || || |||||||| ||| ||||||||||||||||||| Sbjct 2728292 CTTCTGGCTCAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTTTCCAACGAGCTCATCTC 2728233 Query 25998 CAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCA 26057 | |||||||||||||||| || || ||||||||||||| | | |||| ||| | Sbjct 2728232 GCGTGACGAGGGTCTCCACACTGACTTCGCCTGCCTGCTCTTCTC---CCAC---CTCAA 2728179 Query 26058 CAA---ACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAA 26114 ||| || || ||| || | |||||| || ||||| | |||||| | Sbjct 2728178 CAAGCGCCCGAGCAAACAGATGATCCAGGACATCATCGTCGATGCTGTCAAAATCGAGCA 2728119 Query 26115 GGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAG 26174 |||||| | | ||||||||| | ||||||| Sbjct 2728118 GGAGTTCCTCACCGAAGCTCTCCCCTGCGGTCTGCTCGGCATGAACTCTACTCTCATGAA 2728059 Query 26175 CCAATACATTGAGTATGTGGCCGACCATCTGCT-GT-GCCAGCTGGGACTCGCCAGACTC 26232 || |||||||||| ||| ||||||| ||| || || ||| || || || | || Sbjct 2728058 GCAGTACATTGAGTTTGTTGCCGACCGTCTCCTCGTCGCC--CTCGGCAACGAGAAGGTC 2728001 Query 26233 TAC-AGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAA 26291 ||| || | || ||||| |||||||| ||||| ||||| || | | || |||||||| Sbjct 2728000 TACAAGGTCACC-AACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAA 2727942 Query 26292 CTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321 |||||| || ||| | |||| |||||| || Sbjct 2727941 CTTCTTCGAGAAGCGTGTCGCCGACTACCA 2727912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844695504960