Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1 122 3e-22 seq2 109 2e-18 seq4 89.7 2e-12 >seq1 Length=7510044 Score = 122 bits (134), Expect = 3e-22 Identities = 190/272 (70%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 ||||||| ||||| | |||||||||||| ||||| || | || || || || Sbjct 1483147 TCTTCCAGGGCCTTGACGAGACGACGCTGAATGTAACCGGTCTCGGCAGTCTTGACTGCC 1483206 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGC 302691 || ||||| ||||| |||||||| |||| || |||||||| | ||| || || Sbjct 1483207 GTGTCAATCAGACCCTCACGACCAGCCATGGCGTGGAAGAAGAACTCGCTAGGAGTCAGA 1483266 Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTA 302751 || | | ||||| |||| ||||| ||||| ||||| || || | ||| ||| || Sbjct 1483267 CCGCGGAGGTAGGAGTTCTCGACGAACCCACGAGCCTCAGGAGAGTAATCGTCCTTTGTG 1483326 Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811 ||||| |||||||| | || || | ||| | || || ||||| || ||||| ||||| Sbjct 1483327 AAGTGCGGCAGGGTACGGTACTTGAATCCGAAGGGAATTCGCTTGCCCTCAACAATCTGC 1483386 Query 302812 TGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 || || | | | | ||||||| ||||| || Sbjct 1483387 TGACCGACGAGGGCAGTCATCTGGGAAATGTT 1483418 >seq2 Length=7157451 Score = 109 bits (120), Expect = 2e-18 Identities = 165/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 251425 CACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGAT 251484 || || ||||||| | |||| ||||| | || | || || |||| |||| | Sbjct 1411490 CAAACGTGGACGCGGAAAGCGTCAGAGACTTCGAAGAGACGCTCCTTCAGGAAGGCGGCG 1411431 Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 |||||||| | |||||| ||||||||||||||||| |||||||| |||||||| || || Sbjct 1411430 GCACCGTGAGCAATCATGCAATCACGCTCCATTTCTCCGAAACGCAGACCACCGTCACGG 1411371 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604 || | ||||||| | || || || || | | | ||| ||| || |||| || Sbjct 1411370 GCACGACCCTCGACGGGTTGGCGCGTCATGATCTGGACAGGCCCGCGGGCGCGGGCGTGG 1411311 Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 ||| || | ||||| || ||||||||||||| | | || |||| ||||| Sbjct 1411310 ATCTTGTCGTCGACCATGTGACGGAGACGCTGGTAGTAGGTAGGTCCGAAGAAGA 1411256 Score = 93.3 bits (102), Expect = 1e-13 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 |||||||| ||||||||| ||||| |||||||| ||||||||||||||||| | | Sbjct 1411076 TGGGCGATTGTCATACGAGACGGAATGGCATGGGGGTTGATGATGATGTCGGGGGTAATG 1411017 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAATGTTTCCAATAGTTCCCTTTTGT 251958 || ||||| ||||||||||| |||| | | || || || || ||||| || Sbjct 1411016 CCTTCAGCGGTGAAGGGCATGTCCTCCTGGCGGAACGTGAGACCGATCGTACCCTTCTGA 1410957 Query 251959 CCGTGACGAGAACTGAACTTATCACCAAT 251987 ||||||||||| ||| || || || || Sbjct 1410956 CCGTGACGAGACGCGAATTTGTCTCCGAT 1410928 >seq4 Length=5903436 Score = 89.7 bits (98), Expect = 2e-12 Identities = 135/191 (71%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 251472 GGTGAAGC-GAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAA 251530 || ||||| | || || |||| | ||| | ||| || ||||||||||| || | ||||| Sbjct 4713226 GGAGAAGCTGCGACGCCCCGTACGCAATGAGACAGTCGCGCTCCATTTCTCCCAGACGAA 4713167 Query 251531 GACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGA 251590 |||||||||| | | | |||||||| |||||| | || || | | ||||| Sbjct 4713166 GACCACCATCTCTGGAACGACCCTCGGTAGGCTGTCTCGTCAGGATGGCGCGTGGACCTC 4713107 Query 251591 TGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGAC 251650 | ||||| || ||| || | ||||| |||||||| ||||||||| | ||| | Sbjct 4713106 TTGAGCGAGAGTGCATCTTGTCTTGAACCATGTGCTTGAGGCGCTGGTAGTAGATGGGGC 4713047 Query 251651 CGATGAAGATG 251661 || |||||||| Sbjct 4713046 CGTTGAAGATG 4713036 Score = 87.8 bits (96), Expect = 5e-12 Identities = 136/194 (70%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 155969 CTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGG 156028 |||||| | |||||| ||||| || || || | ||| || | ||||| || || Sbjct 5783339 CTCCTCCTTGCCGTGGTTCTTGCGCAGGTCCAGGAACTCGAAGACATCAGCGTGCCACGG 5783280 Query 156029 CTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGC 156085 ||| || || || || ||| || | |||| |||||||| || ||||| || || Sbjct 5783279 CTCAAGGTAGATGGCGAAAGCGCCGGGGCGCTTGTTGCCACCCTGGTCGACATAGCGGGC 5783220 Query 156086 AGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCG 156145 || || ||||| |||| ||||| || || ||||| ||||| ||||| ||||| ||| Sbjct 5783219 GGTGTTGTTGAACACACGCAGCATGGGGATGATACCGTTGGAGGTGCCGTTGGTGCCGGC 5783160 Query 156146 AATATGCGAACCAG 156159 ||| | ||||||| Sbjct 5783159 AATGTAAGAACCAG 5783146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817430281033