Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq4 147 2e-30 seq6 118 1e-21 seq3 105 6e-18 >seq4 Length=5903436 Score = 147 bits (162), Expect = 2e-30 Identities = 960/1526 (63%), Gaps = 60/1526 (4%) Strand=Plus/Minus Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 ||||| ||||| || || | || || || ||| ||||| |||| ||||||| || Sbjct 5784283 ACCTGGAATTCGCCAGCAAGCACGCGGCGCTGGTAGATGTTCGAGGTGTAAGGCTCGAAG 5784224 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627 |||||||||| || || ||||||| |||| || || |||||| || || | | Sbjct 5784223 CATTCGTTGTTGCCAAGGATCTGAGATGTGGAAGCAGTGGGCATGGGGGCAACGAGCAAG 5784164 Query 138628 GAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCG 138687 || || | ||||| ||||||| | ||||| || || ||| ||||| | || Sbjct 5784163 CTGTTGCGGACTCCGTGCTGCTTGATCTGCTCCTTCAGAGAGTCCCAATCCCAGAGGTCA 5784104 Query 138688 CTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCC----AAACTTGCGGGACTGCC 138743 | || || | ||||||||||||||| | |||||| | || | ||| ||| Sbjct 5784103 GTGGGCTTGACATCCCACATATCGTACTGGAGGATTCCCTGGGAGACAGG--GGA--GCC 5784048 Query 138744 TTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCG---AGCGC 138800 ||||||| ||| || ||| || || | || ||| | | | || || Sbjct 5784047 CTCGTACGTGGAGTAGGTGCCCTGCTCCTGAGCAAGCT---TGCAGGACATGGTCAGGGC 5783991 Query 138801 ACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTA 138860 | | | ||| || || || ||||||| |||||| |||||||||| |||| | Sbjct 5783990 AGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCACGGGCCTCGGGAGACTCGAA 5783931 Query 138861 CGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCG 138920 ||||||||||| ||| ||||||||||| || || || |||| |||| || || Sbjct 5783930 AGGCATGCGGAGGGCGAGGAAGGCGTCGGCCAGACCCTGAACACCCAGACCGATGGGACG 5783871 Query 138921 ATGGCGCAGATTTGACGCTTTTGCGG----CTTCGATAGGATAATAGTTTACATCGATGA 138976 |||||||| || ||| |||||| | | | || || ||||| || ||||||| Sbjct 5783870 ATGGCGCA----TGTTGCTGTTGCGGGCCTCCTGAACGGGGTAGTAGTTGACGTCGATGA 5783815 Query 138977 TTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGT-TCAAAATCGTAT 139035 | ||||| | || | ||| || |||| || | | | | | | | || ||||| Sbjct 5783814 TCTTGTTCAGGTTCCTCACAACGACCTGTGT-GACCTCGTGCAGCTTCTTGAAGTCGTAG 5783756 Query 139036 GTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTG 139095 ||| |||||| ||| |||| || | | ||| ||||| | |||| Sbjct 5783755 ACACCCTCGTTGTAGTCCACGA-------AAGAGGGGAGCGCCAA--GGAGGCAAGGTTG 5783705 Query 139096 CACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACAC 139155 || || || || || || ||| | | ||| |||| || || | |||| || | Sbjct 5783704 CAGACAGCGACCTCATCAGGGGCACAGTACTCGATGATCTCCGTGCACAGGTTGGAGCTG 5783645 Query 139156 TTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATA 139215 ||| || || | || | || ||||| || | ||| || ||||||||||| Sbjct 5783644 CGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTCCTGTTGGCGTGGTCCTTGTAAAGCATG 5783585 Query 139216 TACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGT 139275 | || ||||||| || || | ||| | ||| | || || | | || | Sbjct 5783584 AAGGGGTTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCAT---ACCAGAGCTT--CTGGG 5783530 Query 139276 ATTTGACGCACGT---AAAGTTCGTCGC--GCTCGTACTTTTCGTAGAGTTCGTCGAA-T 139329 ||| | | | | || ||| ||||||||||||||| || | ||||| | Sbjct 5783529 CCCTGATGGTCTTCCGACCCTTGCCCGCCTTCTCGTACTTTTCGTACAGAGCCTCGAACT 5783470 Query 139330 CGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACG 139389 || || || ||| ||| | ||| | | |||| || || ||||| || | ||| || Sbjct 5783469 CG-TCGCCATAGCAGTCGGCGAGACCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTCG 5783411 Query 139390 CCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCG 139449 |||||| || ||| ||| ||||||| ||||| || ||||| | |||| | | |||| Sbjct 5783410 CCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGGATCCAGAGGGCGAGGAATAGATCG 5783351 Query 139450 CGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCA 139509 || || || ||| || ||| || || ||||| || || || ||| Sbjct 5783350 CGAGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCCAGGAACTCGAAGACATCA 5783291 Query 139510 GCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACCTTGATCG 139566 |||||||| || || || |||||||| | ||||| || |||||||| || ||| Sbjct 5783290 GCGTGCCACGGCTCAAGGTAGATGGCGAAAGCGCCGGGGCGCTTGTTGCCACCCTGGTCG 5783231 Query 139567 ACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCG 139626 || | || | | || ||||| || |||| ||| || | |||| | | || ||| Sbjct 5783230 ACATAGCGGGCGGTGTTGTTGAACACACGCAGCATGGGGATGATACCGTTGGAGGTGCCG 5783171 Query 139627 TTGGTGCTACGG--ATG---GGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGA 139681 ||||||| ||| ||| | || || || |||| | || || || | ||| | Sbjct 5783170 TTGGTGC--CGGCAATGTAAGAACCAGTG---GCACGGATGCGGTGGACGTTCAGGCCAA 5783116 Query 139682 TTCCGCCGCCAAATTTGGATATTAAAACGCA-ATCGCGTAATGTCTCGTATATACCTCTT 139740 | ||||| | | ||||| || | | || || | | || ||||| || || Sbjct 5783115 TGCCGCCAGCCATCTTGGAAATCATGGCACAGGTCTTG-AGGGTGTCGTAGATGCCCTCG 5783057 Query 139741 ATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCG 139800 |||||||| |||| ||| ||| || ||||| || || ||||| | | ||||| Sbjct 5783056 ATGCTGTCCTCCTTCATGTCGACGAGGAAGCAGGAAGACAGTTGAGCCTGGGGGGTGCCC 5782997 Query 139801 GCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTT 139860 || || || || || || || ||||| | || | ||||||| | ||| || Sbjct 5782996 GCATTGAATAGGGTGGGCGAGGCATGAGTGAAGAATTTGCTGGACATCAGGTTGTAGGTC 5782937 Query 139861 TCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGT 139920 |||||| ||| | | | ||| || ||| ||||| | || ||||| | ||| || Sbjct 5782936 TCGATGACGCGCTCGACATCATCACCCCAGATGCCGACGGCAACCCGCATAATCATGTGC 5782877 Query 139921 TGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTG 139980 || || || || | | ||| || | || ||| ||| ||| ||||||||| Sbjct 5782876 TGAGGGCGCTCTGCGATCTTGCCATCCAACTTGAGCAGGTAAGATCGCTCCAGGGTCTTG 5782817 Query 139981 TAGCCAAAGTACCTATAGTTGAAATC 140006 |||| |||||| |||||||| || Sbjct 5782816 AAGCCGAAGTACTGGTAGTTGAAGTC 5782791 >seq6 Length=5170228 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || ||||| || |||||||| || ||||| ||| | || Sbjct 5110183 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACTATTACCCTGGAAGTCGAATCGTCC 5110124 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || || || || || ||||| || || Sbjct 5110123 GACACGATCGATAACGTGAAGTCGAAGATCCAGGATAAGGAGGGTATTCCTCCTGACCAG 5110064 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| || || || |||||||| ||| | | | |||| ||||| ||| Sbjct 5110063 CAGCGCCTGATCTTCGCTGGAAAGCAGCTGGAAGATGGACGTACCCTGTCGGATTACAAC 5110004 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 || || ||||| ||||| || || Sbjct 5110003 ATCCAGAAGGAGTCGACTCTGCA 5109981 >seq3 Length=5970797 Score = 105 bits (116), Expect = 6e-18 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || || || ||||| ||||| || || || || || | Sbjct 631138 ACCATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCG 631079 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 ||||||| | || | || || |||||||| ||||| || || || || ||||| Sbjct 631078 TCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGAC 631019 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || || ||||||| ||||| || ||||| ||||| | | | | || || || Sbjct 631018 CAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTAC 630959 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 ||||| || ||||| || || || ||| | ||| |||| | || || ||||| Sbjct 630958 AACATCCAGAAGGAGTCCACCCTTCACCTCGTGCTGCGCCTCCGTGGTGGCGG 630906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897549386520