Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq6 188 1e-41 seq4 168 1e-35 seq2 131 3e-24 seq5 122 1e-21 seq1 86.0 1e-10 >seq6 Length=5170228 Score = 188 bits (208), Expect = 1e-41 Identities = 304/435 (70%), Gaps = 8/435 (2%) Strand=Plus/Minus Query 2019003 GACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGCCCGGCACGGGCAAGACCACGAGC 2019062 || || ||||||||| | || | | ||||| ||| || | |||||||| || || Sbjct 2482795 GAGGGAAACATGCCCCATGTCATCATCTCGGGCATGCCTGGAATCGGCAAGACGACCAGT 2482736 Query 2019063 ATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTC 2019122 | |||||| ||||| ||| |||| | | | | |||||||| || || || Sbjct 2482735 GTGCTGTGCCTCGCGCGGCAGCTTCTGGGGGACACATACAAGGAGGCCGTCCTGGAGCTG 2482676 Query 2019123 AATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATCATCAAG--CATCACGCTT 2019180 ||||| |||||| | ||| | |||||||| || | ||||||| | || ||| Sbjct 2482675 AATGCCAGTGACGAGAGAGGCATCGACGTCGTCCGAAACCGCATCAAGGGCTTCGCGC-- 2482618 Query 2019181 CGAAAAGAA--TCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGA 2019238 | ||||| || ||| ||| |||||||||| ||| | ||||||| || || ||||| Sbjct 2482617 --AGAAGAAGGTCACCCTCCCGGCCGGCCGCCATAAGCTCGTCATCCTTGACGAAGCCGA 2482560 Query 2019239 CTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACAC 2019298 | || | || |||| |||||||| |||||||| || ||||| | ||| ||||||| Sbjct 2482559 CAGCATGACCTCGGGCGCCCAGCAAGCCCTCCGCCGCACGATGGAGATCTACTCCAACAC 2482500 Query 2019299 GACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCG 2019358 |||||| || || | ||||||||| |||| | | ||||||| | || ||| ||| Sbjct 2482499 GACGCGATTCGCCTTTGCCTGCAACCAGTCGAACAAGATCATCGAGCCTCTGCAGTCCCG 2482440 Query 2019359 TTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGA 2019418 ||||||||| | |||| | ||||||||||||||||| ||| | ||| ||| | Sbjct 2482439 CTGCGCCATCCTCCGCTACGGCCGCCTCACCGACGCCCAAGTCGTCAAGCGCCTGATGCA 2482380 Query 2019419 GATTATCGACGCCGA 2019433 ||| ||||| ||||| Sbjct 2482379 GATCATCGAGGCCGA 2482365 >seq4 Length=5903436 Score = 168 bits (186), Expect = 1e-35 Identities = 341/504 (68%), Gaps = 19/504 (4%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||||||||| || |||| ||| || || || |||||||| | | |||||||| Sbjct 5783237 CTGGTCGACATAGCGGGCGGTGTTGTTGAACACACGCAGCATGGGGATGATACCGTTGGA 5783178 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 |||||||||||| || | ||| | || | ||| || | ||| || | ||| Sbjct 5783177 GGTGCCGTTGGTGCCGGCAATGTAAGAACCAGTGGCACGGATGCGGTGGACGTTCAGGCC 5783118 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 |||||||| ||| |||||| || | || || | || || || |||||||||||||| Sbjct 5783117 AATGCCGCCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTGTCGTAGATGCCCTC 5783058 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||| ||| |||||||||| | || ||||| || || ||| | | | ||||| Sbjct 5783057 GATGCTGTCCTCCTTCATGTCGACGAGGAAGCAGGAAGACAGTTGAGCCTGGGGGGTGCC 5782998 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTG--GGACATGGCCTCGTAG 2073837 |||||||| || ||||||| || ||| | || | ||| |||||| | |||| Sbjct 5782997 CGCATTGAATAGGGTGGGCGAGGCATGAGTG-AAGAAT-TTGCTGGACATCAGGTTGTAG 5782940 Query 2073838 GTGGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCG 2073897 || ||| |||||| | ||| || || || || ||||| ||| Sbjct 5782939 GTCTCGATGACGCGC------------TCGACATCATCA---CCCCAGATGCCGACGGCA 5782895 Query 2073898 ACGCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTAG 2073957 || ||||| ||||||| ||| || ||||| ||| | | || |||| |||||| Sbjct 5782894 ACCCGCATAATCATGTGCTGAGGGCGCTCTGCGATCTTGCCATCCAACTTGAGCAGGTAA 5782835 Query 2073958 GACCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGATG 2074017 || || ||||||| | ||| |||||| |||| | ||| || || | | |||| Sbjct 5782834 GATCGCTCCAGGGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCACGGTCATAGACGATG 5782775 Query 2074018 GCGGCGTCGAGGGCCTCCTTGTGC 2074041 |||| |||||| ||||||||||| Sbjct 5782774 GCGGAGTCGAGTTCCTCCTTGTGC 5782751 Score = 131 bits (144), Expect = 3e-24 Identities = 295/445 (66%), Gaps = 12/445 (3%) Strand=Plus/Minus Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTT 2071631 ||| || || ||| ||||||||||||| | || ||||||| ||||||| |||||| Sbjct 5783676 ACTCGATGATCTCCGTGCACAGGTTGGAG--CTGCGGATGGTGCCGAGGTTCTTCTGGTT 5783619 Query 2071632 GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGC 2071691 ||| || |||| || |||||||| |||||| |||| || |||||| |||| || Sbjct 5783618 GCTCTTCCTGTTGGCGTGGTCCTTGTAAAGCATGAAGGGGTTGCCAGTCTCGGTCTGGGC 5783559 Query 2071692 CGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGA-GGTCCTCGCGCG---GCCCT 2071747 | || |||||| |||| | || |||| | || |||| || | |||| Sbjct 5783558 CTCGAGGATGGCATACCAGA----GCTTCTGGGCCCTGATGGTCTTCCGACCCTTGCCCG 5783503 Query 2071748 NNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGG 2071807 | || || || || || |||| | ||| ||| || || | Sbjct 5783502 CCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCGTCGCCATAGCAGTCGGCGAGACCAG 5783443 Query 2071808 GCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACA 2071867 | |||| ||||| | || | |||||||||| || | || || ||| || | Sbjct 5783442 GGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGA 5783383 Query 2071868 GGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGT 2071927 | ||| |||| ||| || || |||||||| || ||| ||||||||||||||||| Sbjct 5783382 GATCGGGGATCCAGAGGGCGAGGAATAGATCGCGAGCACGGACCTCCTCCTTGCCGTGGT 5783323 Query 2071928 TCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAA 2071987 |||| |||||| || | |||| || || |||||||||||||| |||||| ||| | Sbjct 5783322 TCTTGCGCAGGTCCAGGAACTCGAAGACATCAGCGTGCCACGGCTCAAGGTAGATGGCGA 5783263 Query 2071988 AGGCGCCCTTGCGCTTGCCGCCGCC 2072012 | ||||| ||||||| ||| || Sbjct 5783262 AAGCGCCGGGGCGCTTGTTGCCACC 5783238 >seq2 Length=7157451 Score = 131 bits (144), Expect = 3e-24 Identities = 92/105 (88%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 2035651 CCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTA 2035710 |||||||||| |||||||||||||| ||||| | || ||||||||||| |||||| | | Sbjct 3014296 CCAACTACCTGGACATCAAGCCCCTTCTCGACGTCGGCTGCAAGACCGTCGCCAACATGA 3014355 Query 2035711 TCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755 ||||||||||||| ||||| || |||||||||||||| ||||||| Sbjct 3014356 TCAAGGGCAAGTCCCCCGACGAGATCCGCAAGACCTTCAACATCA 3014400 >seq5 Length=5645814 Score = 122 bits (134), Expect = 1e-21 Identities = 185/260 (71%), Gaps = 5/260 (2%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || ||| | || ||| |||||| |||||||||||||| ||| Sbjct 2727898 TGACCCCAGCCTTCTGGTAGTCGGCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGA 2727957 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| |||||| | ||| ||||||| | |||| ||||||| |||| Sbjct 2727958 GAGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGACCTTGTAGACCTTCTCGTTGCCGA 2728017 Query 794011 --GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 |||||| || || |||||||| || || ||||||||||| |||||| | | ||| Sbjct 2728018 GGGCGACG--AGGAGACGGTCGGCAACAAACTCAATGTACTGCTTCATGAGAGTAGAGTT 2728075 Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128 |||||||| || | ||| || | ||| ||| ||||| | |||||| | ||| || Sbjct 2728076 CATGCCGAGCAGACCGCAGGGGAGAGCTTCGGTGAGGAACTCCTGCTCGATTTTGACAGC 2728135 Query 794129 CTCGATGATGATCTGCCTGG 794148 |||| |||||| | ||||| Sbjct 2728136 ATCGACGATGATGT-CCTGG 2728154 Score = 96.9 bits (106), Expect = 5e-14 Identities = 96/122 (79%), Gaps = 2/122 (2%) Strand=Plus/Plus Query 794547 CGTGTCGATGGCGCGAAAGAGGT-GGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGA 794605 |||||| |||||| ||||||| ||| | | || || ||||||| |||||| || | Sbjct 2728482 CGTGTCAATGGCGTTGAAGAGGTAGGTGCGTTGGGAA-GGCTCCTTGATGTAGGTATCAA 2728540 Query 794606 TGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGC 794665 |||| || ||||||||||| ||||||||||| || || |||||||||||| || |||| Sbjct 2728541 TGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGC 2728600 Query 794666 AG 794667 || Sbjct 2728601 AG 2728602 Score = 87.8 bits (96), Expect = 3e-11 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 2175077 GCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGTG 2175136 ||||||||| ||||| || |||||||| || || || | ||||| |||||||| Sbjct 3876171 GCCGTCGGTTCCGTTCTTGAACCCGACGGGGAAACTGAGACCGCTCGCCAGCTCGCGGTG 3876230 Query 2175137 CACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCC 2175172 || |||||||||||| ||||||||||| |||||||| Sbjct 3876231 CAGCTGGCTCTCGGTCGTGCGCGCGCCGACGGCGCC 3876266 Score = 86.0 bits (94), Expect = 1e-10 Identities = 101/134 (75%), Gaps = 2/134 (1%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| || ||| | |||||| |||| ||||||||||| ||||||||||| Sbjct 2728220 ACCCTCGTCACGCGAGATGAGCTCGTTGGAAAAGGTCAGGCCGGGCATCAGGCCGCGCTT 2728279 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCG-AGAAAAAGATGCCCTCGACGGCGGCAA 794458 ||||||||| ||||||| || ||| ||| ||| ||||| ||||| ||||| || | Sbjct 2728280 CTTGAGCCAGAAGATGG-ACGCAAAGGCACCGCTGAAGAAGATACCCTCAACGGCAGCGA 2728338 Query 794459 AGCCGACGAGCCGC 794472 | |||| || ||| Sbjct 2728339 AAGCGACCAGACGC 2728352 >seq1 Length=7510044 Score = 86.0 bits (94), Expect = 1e-10 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 429519 GGGTGGACCGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGAACCGGCAGCCG 429578 || |||| || || || |||||| || |||||| | || | ||||| ||||| Sbjct 1484402 GGATGGAAGGTGGAACGTCACCTGATGACGGGCGACTATATCATCTTCAACCGTCAGCCC 1484343 Query 429579 TCGCTCCACATGGGGTCGATGCTCAACCACAAGGTGGTGCCCATGCCCGGTCGCACCTTC 429638 || || |||| || || ||| | |||| ||| ||||||| |||||| Sbjct 1484342 TCTCTGCACAAGGAATCCATGATGGGTCACAGGGTTCGCGTCATGCCCTACTCTACCTTC 1484283 Query 429639 CGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGAGATGAAC 429698 || || ||||| | || ||| ||||||||||||| || ||||| |||||||||||| Sbjct 1484282 CGCCTGAACCTCTCGGTCACGTCTCCCTACAACGCCGATTTCGACGGTGACGAGATGAAC 1484223 Query 429699 CTGCACGTGCCCCAG 429713 || ||||| |||||| Sbjct 1484222 CTCCACGTTCCCCAG 1484208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916245442628951