Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq3 140 2e-28 seq6 123 2e-23 seq5 102 5e-17 >seq3 Length=5970797 Score = 140 bits (154), Expect = 2e-28 Identities = 163/218 (75%), Gaps = 8/218 (4%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || ||||||| |||| ||||||||| ||||| ||||| || ||| |||| | || Sbjct 630923 CAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTC 630982 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| |||||||||||||| || |||||||| | || | ||||||||||| Sbjct 630983 CTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTC 631042 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940 | || || ||||| || | ||||| || | ||| || |||| ||| | Sbjct 631043 CTGGATCTTGGACTTGAC--AT--TGTCGATGGTGTCGGACGACTCCACCTCAAGGGTGA 631098 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | ||||| |||||||||||||| || |||||||||||| Sbjct 631099 TAGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCATG 631136 >seq6 Length=5170228 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||| || || | || ||||||||| ||||| || ||||| ||| | || |||| Sbjct 5109971 CAGGACGAGATGCAGAGTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTACGTCCATC 5110030 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| |||||||| ||||||||||| || |||||||| | || | |||||||| || Sbjct 5110031 TTCCAGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTATC 5110090 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || || ||| | |||| || | ||||| || | ||| || || Sbjct 5110091 CTGGATCTTCGACTTCACGTTATCGATCGTGTCGGACGATTCGACTTCCAGGGTAATAGT 5110150 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || ||||||||||| |||||||||||||| Sbjct 5110151 CTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 5110183 Score = 118 bits (130), Expect = 7e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | ||| ||||||||| ||||| ||||| || ||| |||| |||| Sbjct 5110200 AGGACGAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 5110259 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || || ||||| || || |||||||| | || | ||||||||||| Sbjct 5110260 TCCAACTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 5110319 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | ||| | |||||| || | || |||||| Sbjct 5110320 TGGATCTTGCTCTTCACGTTGTCGATTGTGTCAGAAGACTCGACTTCCAGAGTGATGGTC 5110379 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| ||||||||||| || || ||||||||| Sbjct 5110380 TTTCCGGTGAGGGTCTTGACGAAAATCTGCATG 5110412 Score = 118 bits (130), Expect = 7e-22 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | |||| ||||||||| || || ||||| || ||| |||| |||| Sbjct 5110428 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCC 5110487 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| |||||||| ||||| || |||||||| | || | ||||||||||| Sbjct 5110488 TCAAGTTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 5110547 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | |||||| || | || |||||| Sbjct 5110548 TGGATCTTCGACTTGACGTTGTCGATGGTATCGGAAGACTCGACCTCGAGAGTGATGGTC 5110607 Query 34946 TTTCCCGTGAGGGTCTTTAC 34965 ||||| || |||||||| || Sbjct 5110608 TTTCCGGTCAGGGTCTTGAC 5110627 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | ||| ||||||||| ||||| ||||| |||| |||| | || Sbjct 5051897 AGAACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTTAGGGTGCGACCGTCC 5051838 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || ||||| || || || ||||| || | || | ||||||||||| Sbjct 5051837 TCGAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCC 5051778 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || || ||| || |||| ||| |||||| Sbjct 5051777 TGGATCTTGGACTTGACGTTGTCAATGGTATCCGAGGACTCCACCTCAAGGGTGATGGTC 5051718 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || || ||||| || |||||||||||| Sbjct 5051717 TTGCCAGTCAGAGTCTTGACGAAGATCTGCATG 5051685 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | ||| ||||||||| ||||| ||||| |||| |||| | || Sbjct 5110713 AGAACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTTAGGGTGCGACCGTCC 5110772 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || ||||| || || || ||||| || | || | ||||||||||| Sbjct 5110773 TCGAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCC 5110832 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || || ||| || |||| ||| |||||| Sbjct 5110833 TGGATCTTGGACTTGACGTTGTCAATGGTATCCGAGGACTCCACCTCAAGGGTGATGGTC 5110892 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || || ||||| || |||||||||||| Sbjct 5110893 TTGCCAGTCAGAGTCTTGACGAAGATCTGCATG 5110925 Score = 105 bits (116), Expect = 4e-18 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 34780 GGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCC 34839 |||| ||||||||| || || ||||| || ||| |||| |||| || |||||||| || Sbjct 5052168 GGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGTTGCTTGCC 5052109 Query 34840 GGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTT 34899 |||||| ||||| || |||||||| | || | ||||||||||| | || || || Sbjct 5052108 GGCGAAAATCAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTT 5052049 Query 34900 GACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGT 34959 |||| | || | || | |||||| || | || ||||||||||| || ||||| Sbjct 5052048 GACGTTGTCGATGGTATCGGAAGACTCGACCTCGAGAGTGATGGTCTTTCCGGTCAGGGT 5051989 Query 34960 CTTTAC 34965 ||| || Sbjct 5051988 CTTGAC 5051983 >seq5 Length=5645814 Score = 102 bits (112), Expect = 5e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| || ||| |||| |||| || || ||||| |||||||||| Sbjct 3291299 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 3291358 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 |||| || |||||||| | || | ||||||||||| | || || |||||| Sbjct 3291359 TCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 3291418 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | || | || | ||| || || | ||| || ||||| ||||| |||||||| || | Sbjct 3291419 CAATGGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTAAGGGTCTTCACGA 3291478 Query 34968 A 34968 | Sbjct 3291479 A 3291479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692764275571