Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq5 145 1e-28 seq4 141 1e-27 seq2 95.1 2e-13 seq1 87.8 3e-11 >seq5 Length=5645814 Score = 145 bits (160), Expect = 1e-28 Identities = 246/346 (71%), Gaps = 19/346 (5%) Strand=Plus/Minus Query 1455772 GCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCG 1455831 || ||| ||| | |||||| || ||||||||||||||||| ||||| ||||||||| ||| Sbjct 2728818 GCAGATCTGGCAGATGTAC-AAGAAGGCCGAGGCCTCCTTCTGGACTGCCGAGGAGATCG 2728760 Query 1455832 ACCTCGGCGCCGACACGG---TCCAC---TGGGTGTCGCTGAGCGACGACGA-GCGCCAT 1455884 |||| | | || || ||||| ||| || | |||| || | | || Sbjct 2728759 ACCT----GTC--CAAGGATCTCCACGATTGGAACAACAAGATCAACGATGATGAGAAAT 2728706 Query 1455885 --TTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAAC 1455942 |||||| ||| |||| || ||| ||||||||| ||| ||||| || ||||||| Sbjct 2728705 ACTTCATCTCTCACATCCTGGC-TTTCTTCGCCGCCTCCGACGGCATTGTCAACGAGAAC 2728647 Query 1455943 CTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTC 1456002 || | || || |||| |||||||| | || ||||| || | || ||||| ||| Sbjct 2728646 CTCGTCGAGCGTTTTAGCGGCGAGGTCCAGATTCCCGAGGCTCGCTGCTTCTACGGCTTC 2728587 Query 1456003 CAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTC 1456062 |||||| || || ||||||||||| || |||||||| || || || || |||||| || Sbjct 2728586 CAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATTGATACCTACATC 2728527 Query 1456063 AAGGACCCGGTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACACG 1456107 ||||| || || | | ||| ||||||| |||||| |||||| Sbjct 2728526 AAGGAGCC-TTCCCAACGCACCTACCTCTTCAACGCCATTGACACG 2728482 Score = 123 bits (136), Expect = 4e-22 Identities = 230/331 (69%), Gaps = 10/331 (3%) Strand=Plus/Minus Query 1456448 GGTTTGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACC 1456507 ||| | ||| |||||| ||||| ||||||| | | | | ||||||||| ||| | Sbjct 2728222 GGTCTCCACACTGACTTCGCCTGCCTGCTCTTCTCC---CACCTCAACAAGCGCCCGAGC 2728166 Query 1456508 GACG---TGCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGC 1456564 | || | || | ||||||||||| || ||| | |||||| | ||||| ||| | Sbjct 2728165 AAACAGATGATCCAGGACATCATCGTCGATGCTGTCAAAATCGAGCAGGAGTTCCTCACC 2728106 Query 1456565 GAGTCGCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGA 1456624 || | || || | || ||||||||||| | || |||||| ||||||||||| Sbjct 2728105 GAAGCTCTCCCCTGCGGTCTGCTCGGCATGAACTCTACT-CTCATGAAGCAGTACATTGA 2728047 Query 1456625 ATTTTGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCC 1456684 ||| || |||||||| || |||| || |||||| || ||||| |||| | || Sbjct 2728046 GTTT-GTTGCCGACCGTCTCCTCGTCGCCCTCGGCAACG-AGAAGGTCTACAAGGTCACC 2727989 Query 1456685 AACCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGC 1456744 ||||| ||| | |||||| ||||| |||| |||||||||||||| |||||| Sbjct 2727988 AACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACTTCTTCGAGAAG 2727929 Query 1456745 CGCGT-GGCGAGTACGCCAAGGCCGGCGTCA 1456774 || || | ||| ||| ||||| || |||| Sbjct 2727928 CGTGTCGCCGACTACCAGAAGGCTGGGGTCA 2727898 >seq4 Length=5903436 Score = 141 bits (156), Expect = 1e-27 Identities = 337/504 (67%), Gaps = 19/504 (4%) Strand=Plus/Plus Query 259681 GCACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTT 259740 ||||||||||| |||||| | |||||| | | | ||| ||||| |||| |||||| Sbjct 5782751 GCACAAGGAGGAACTCGACTCCGCCATCGTCTATGACCGTGACTTCAACTACCAGTACTT 5782810 Query 259741 TGGTCTGGCGACCTTGCGCCGGTCCTACCTGACCAAAGTGCGCGATATTGTCGTCGAGCG 259800 || | |||| || || || |||||| ||| || | | ||| ||||| Sbjct 5782811 CGGCTTCAAGACCCTGGAGCGATCTTACCTGCTCAAGTTGGATGGCAAGATCGCAGAGCG 5782870 Query 259801 GCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGACAA 259860 || ||| | ||| | ||||| || ||| | ||| | |||| | || | Sbjct 5782871 CCCTCAGCACATGATTATGCGGGTTGCCGTCGGCA--TCTGGGGT----------GATGA 5782918 Query 259861 TGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAG-TTGTTCACCTCA- 259918 || | |||| ||| ||| |||||| | ||||| ||||| || ||||| ||| Sbjct 5782919 TG---TCGAGCGCGTCATCGAGACCTACAACCTGATGTC-CAGCAAATTCTTCAC-TCAT 5782973 Query 259919 GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTG 259978 || ||||||| || || ||||| ||||| || | | || || || ||||| || Sbjct 5782974 GCCTCGCCCACCCTATTCAATGCGGGCACCCCCCAGGCTCAACTGTCTTCCTGCTTCCTC 5783033 Query 259979 TTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTC 260038 | |||||||||| || |||||||||||||| ||||| |||||| || || | Sbjct 5783034 GTCGACATGAAGGAGGACAGCATCGAGGGCATCTACGACACCCTCAAGACCTGTGCCATG 5783093 Query 260039 ATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCC 260098 || |||||| ||| |||||||| || | || ||| | || ||| | || | Sbjct 5783094 ATTTCCAAGATGGCTGGCGGCATTGGCCTGAACGTCCACCGCATCCGTGCCACTGGTTCT 5783153 Query 260099 TACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAAC 260158 ||| | || |||||||||||| |||||||| | | |||||||| || || || ||| Sbjct 5783154 TACATTGCCGGCACCAACGGCACCTCCAACGGTATCATCCCCATGCTGCGTGTGTTCAAC 5783213 Query 260159 GACACGGCGCGCTACGTCGACCAG 260182 |||| || ||||| ||||||||| Sbjct 5783214 AACACCGCCCGCTATGTCGACCAG 5783237 Score = 116 bits (128), Expect = 5e-20 Identities = 296/449 (66%), Gaps = 14/449 (3%) Strand=Plus/Plus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 || ||| ||||||| ||||| || ||| |||||| || ||||||||||| || || Sbjct 5783238 GGTGGCAACAAGCGCCCCGGCGCTTTCGCCATCTACCTTGAGCCGTGGCACGCTGATGTC 5783297 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || | | |||||||| |||||||||||||||| |||| ||| || |||| Sbjct 5783298 TTCGAGTTCCTGGACCTGCGCAAGAACCACGGCAAGGA----GGAGGTCCGTGCTCGCG- 5783352 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 |||| || || ||| |||| ||| || || ||| || | | || | || Sbjct 5783353 -ATCTATTCCTCGCCCTCTGGATCCCCGATCTCTTCATGAAGCGTGTCGAGAAGAACGGC 5783411 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027 |||||| | || | ||||| |||| || || || ||| |||||||||| | Sbjct 5783412 GACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGTCTCGCCGACTGCTATGGCGACGAG 5783471 Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCGGA---CCGTCGTGCCC 262084 || || || || || || |||| || || | || Sbjct 5783472 TTCGAGGCTCTGTACGAAAAGTACGAGAAGGCGGGCAAGGGTCGGAAGACCATCAGGGCC 5783531 Query 262085 GCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATG 262144 || || || |||||| ||||| ||| |||||| | |||||| |||| |||| |||| Sbjct 5783532 -CA-GA-AGCTCTGGTATGCCATCCTCGAGGCCCAGACCGAGACTGGCAACCCCTTCATG 5783588 Query 262145 GTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA-CGACAGA 262203 | ||||||||| || |||| || ||||||||| ||||||| ||||||| | ||| Sbjct 5783589 CTTTACAAGGACCACGCCAACAGGAAGAGCAACCAGAAGAACCTCGGCACCATCCGCAGC 5783648 Query 262204 GGCCAACCTGTGCACCGAGATCGTCCAGT 262232 ||||||||||||| |||||| || ||| Sbjct 5783649 T-CCAACCTGTGCACGGAGATCATCGAGT 5783676 Score = 104 bits (114), Expect = 3e-16 Identities = 351/543 (65%), Gaps = 14/543 (3%) Strand=Plus/Plus Query 262875 CCGCTGGGACTGGGACGCACTGCGGGCGTCGGTTCGA-CAGCATGGCCTGCGCAACTCGT 262933 || |||||| |||||| | ||| || | | | || | ||||| || | |||||| | Sbjct 5784107 CCTCTGGGATTGGGACTCTCTGAAGGAG-CAGATCAAGCAGCACGGAGTCCGCAACAGCT 5784165 Query 262934 TGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGT 262993 ||||||| || | ||||||||| || | || || |||||||| ||||||| ||| | Sbjct 5784166 TGCTCGTTGCCCCCATGCCCACTGCTTCCACATCTCAGATCCTTGGCAACAACGAATGCT 5784225 Query 262994 TCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGG 263053 ||||| ||| ||||||||| |||||||||||| | ||||| || || | Sbjct 5784226 TCGAGCCTTACACCTCGAACATCTACCAGCGCCGCGTGCTTGCTGGCGAATTCCAGGTTG 5784285 Query 263054 TCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTTCGCG 263113 |||||| | ||| ||||| | | || | || || ||| | | | | Sbjct 5784286 TCAACCCCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTCTGGTCTGATGCCATGAAGA 5784345 Query 263114 ACCGGCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCCG 263173 |||| |||| || | | ||||| || ||| || | | | || ||| Sbjct 5784346 ACCGTATCATCGCCGAGAACGGCTCCGTTCAG------AACATCCCTAACATCCCAGCCG 5784399 Query 263174 ATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTGATATGG 263233 | ||||||| || | ||||||||| |||||| | || | || | | || | |||| Sbjct 5784400 AAGTCAAGGCCCTGTACAAGACCGTCTGGGAGATTTCCCAGCGTGCTGTCGTTCAGATGG 5784459 Query 263234 CGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGACC 263293 | || ||||||| ||| |||||||| ||||||||| ||| | | | |||| Sbjct 5784460 CCGCTGACCGCGGTGCCTTCATCGACCAGTCCCAGTCGCTGAACATCCATATGAAGGACC 5784519 Query 263294 CGAC---GGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAGA 263350 | || || | || ||||| |||||| | | ||| | ||| ||||||| Sbjct 5784520 CCACCATGGGCAAG---ATCACCAGCATGCACTTCGCGGGCTGGAAGCTCGGTCTCAAGA 5784576 Query 263351 CTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTCGATC 263410 | || |||||||| ||||| |||| | | || ||| |||| || ||||| || || | Sbjct 5784577 CGGGAATGTACTACCTGCGTACCCAGGCGGCCGCCGCTCCCATCCAGTTCACAGTTGACC 5784636 Query 263411 AGG 263413 ||| Sbjct 5784637 AGG 5784639 >seq2 Length=7157451 Score = 95.1 bits (104), Expect = 2e-13 Identities = 95/121 (79%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 165768 GGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAGATGGCGTCGGCGCTG 165827 |||||| ||||||| |||||||| ||| |||| ||||||||||| | || || | ||| Sbjct 2006212 GGCGCCATCGGTGCCCGCACCACGGAGTCCCAGCTGCACCGCGAGCTCGCCTCCGGCCTG 2006271 Query 165828 CCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCAGCGT-GGCGACGGCCCTCGATGC 165886 | | ||| | |||||||| ||| |||||||||||||| | |||| | ||| |||| || Sbjct 2006272 TCCTTCCCCGTCGGCTTCAAGAACGGCACCGACGGCAGCCTCGGCGTC-GCCATCGACGC 2006330 Query 165887 C 165887 | Sbjct 2006331 C 2006331 >seq1 Length=7510044 Score = 87.8 bits (96), Expect = 3e-11 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 1817582 CTGGGGCACATGGAGGTTCATCTCGTCGCCGTCAAAGTCGGCATTGTAGGTGCCCGTGAC 1817641 |||||| || ||||||||||||||||| ||||| || ||||| ||||||| |||||| Sbjct 1484208 CTGGGGAACGTGGAGGTTCATCTCGTCACCGTCGAAATCGGCGTTGTAGGGAGACGTGAC 1484267 Query 1817642 GGCCAGGTTGAACCGCATGGTACGGCCGGGCATGGGCACCACCTTGTGCATGAGCATGGA 1817701 | ||||| | || | |||| | ||||||| ||| |||| | |||||| Sbjct 1484268 CGAGAGGTTCAGGCGGAAGGTAGAGTAGGGCATGACGCGAACCCTGTGACCCATCATGGA 1484327 Query 1817702 GCCCATGTGGAGTGAGGGCTGCCGGTTCATCACCACGGCGTCGCCGGCGCGCAGGTGACG 1817761 || |||| || |||||||| ||||| | | | |||||| | ||||||||| Sbjct 1484328 TTCCTTGTGCAGAGAGGGCTGACGGTTGAAGATGATATAGTCGCCCGTCATCAGGTGACG 1484387 Query 1817762 CTCGACTGTCCACCCA 1817777 || || |||| ||| Sbjct 1484388 TTCCACCTTCCATCCA 1484403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177810331933458