Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq5 100 9e-16 seq4 96.9 1e-14 >seq5 Length=5645814 Score = 100 bits (110), Expect = 9e-16 Identities = 120/162 (74%), Gaps = 1/162 (1%) Strand=Plus/Minus Query 443708 GCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCA 443767 ||| || |||||||| |||| || || || | || || ||||| |||| || |||| Sbjct 2728352 GCGTCTGGTCGCTTTCGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTT-GCGTCCA 2728294 Query 443768 TCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCA 443827 |||||||| | || ||||| || || |||| ||| ||||||||| ||||| || ||| Sbjct 2728293 TCTTCTGGCTCAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTTTCCAACGAGCTCATCT 2728234 Query 443828 GTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 || ||||||||| | || ||||||||||| || |||| Sbjct 2728233 CGCGTGACGAGGGTCTCCACACTGACTTCGCCTGCCTGCTCT 2728192 >seq4 Length=5903436 Score = 96.9 bits (106), Expect = 1e-14 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030 ||| || || || ||| | ||||||||||||||| || ||||| ||||| || || || Sbjct 5783183 CGGTATCATCCCCATGCTGCGTGTGTTCAACAACACCGCCCGCTATGTCGACCAGGGTGG 5783242 Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081 | ||| ||||| || || ||| |||||||||| |||||||||||||| || Sbjct 5783243 CAACAAGCGCCCCGGCGCTTTCGCCATCTACCTTGAGCCGTGGCACGCTGA 5783293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588335816845005