Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq4 178 2e-39 >seq4 Length=5903436 Score = 178 bits (196), Expect = 2e-39 Identities = 890/1397 (64%), Gaps = 33/1397 (2%) Strand=Plus/Minus Query 110706 GGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGG 110765 |||||||||| | ||||| || || |||||||| || || || | ||| || | |||| Sbjct 5784252 GGTAGATGTTCGAGGTGTAAGGCTCGAAGCATTCGTTGTTGCCAAGGATCTGAGATGTGG 5784193 Query 110766 AGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTT 110825 | || || ||||| || || | | | ||||| || | || | || |||||| | | Sbjct 5784192 AAGCAGTGGGCATGGGGGCAACGAGCAAGCTGTTGCGGACTCCGTGCTGCTTGATCTGCT 5784133 Query 110826 CCTTGAGAACATCCCAGTCGTAGTTG--AGCTTGGTTTCACCTTCCCACATGTCAAACTG 110883 |||| ||| ||||| || || | || | || || || | ||||||| || |||| Sbjct 5784132 CCTTCAGAGAGTCCCAATCCCAGAGGTCAG-TGGGCTTGACAT-CCCACATATCGTACTG 5784075 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943 || | || ||||| | || || ||||| | || |||| || || | | ||| Sbjct 5784074 GAGGATTCCCTGGGAGACAGGGGAGCCCTCGTACGTGGAGTAGGTGCCCTGCTCCTGAGC 5784015 Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003 | | ||| | ||||| ||||| || ||||| |||||||| | || | Sbjct 5784014 AAGCTTGCAGGACATGGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAG 5783955 Query 111004 CTCCTTGGCTTCATCTGAATC-AAATGCGTAGCGGCACAAAATAAATACATCCGCGAGAC 111062 ||| ||| || || || ||| || | |||| | || | || || |||| Sbjct 5783954 CTCACGGGCCTCGGGAGACTCGAAAGGCAT-GCGGAGGGCGAGGAAGGCGTCGGCCAGAC 5783896 Query 111063 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGG 111122 | |||||||||| ||| || || | || ||||| || || || || || ||||| Sbjct 5783895 CCTGAACACCCAGACCGATGGGACGATGGCGCATGTTGCTGTTGCGGGCCTCCTGAACGG 5783836 Query 111123 GATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCAT 111182 | || | || ||| |||| ||| || || | ||| | || ||||| || | Sbjct 5783835 GGTAGTAGTTGACGTCGATGATCTTGTTCAGGTTCCTCACAACGACCTGTGTGACCTCGT 5783776 Query 111183 GAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTG---ACATACTTTGGAAGGGCGA 111239 | || || | | || | | | ||| | | | || | || || || | Sbjct 5783775 GCAGCTTCTTGAAGTCGTA---GACACCCTCGTTGTAGTCCACGAAAGAGGGGAGCGCCA 5783719 Query 111240 TTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTAC 111299 || || | ||||| ||||| |||||| | |||||| | || || || | Sbjct 5783718 AGGAGGCAAGGTTGCAGACAGCGACCTCATCAGGGGCACAGTACTCGATGATCTCCGTGC 5783659 Query 111300 ATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCAT 111359 | | |||||| || || || || | ||||| ||||| |||||| ||||| | Sbjct 5783658 ACAGGTTGGAGCTGCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTCCTGTTGGCGTGGT 5783599 Query 111360 CCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA 111419 ||||||| |||||| |||| | || ||||| ||||| | | ||| || || | ||| | Sbjct 5783598 CCTTGTAAAGCATGAAGGGGTTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCAGA 5783539 Query 111420 -CATCGGCGGCTGGTACAATGGCGTT--GGCCCGT-CCCTCCGCCTCGTACTTTGTGTAG 111475 | || | | | | |||| || | ||| | ||| || |||||||||| ||| Sbjct 5783538 GCTTCTGGGCCCTG----ATGGTCTTCCGACCCTTGCCCGCCTTCTCGTACTTTTCGTAC 5783483 Query 111476 AGGGCTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 111534 || || || ||||| || || | || ||||| |||||| || || || || || | Sbjct 5783482 AGAGCCTCGAACTCGTCGCC-ATAGCAGTCGGCGAGACCAGGGCACTCGTTGGGGCACAT 5783424 Query 111535 AAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 111594 |||| ||| | || | ||| || ||||||||||| || || || ||||| |||| Sbjct 5783423 CAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGGATCCAGAGGGC 5783364 Query 111595 TGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGA 111653 || ||||| | | ||| || |||| || | || ||||| || | || |||| Sbjct 5783363 GAGGAATAGATCGCGAGCACGGA-CCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCCAGGA 5783305 Query 111654 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGA 111709 |||| | || ||| |||||||| |||||||| |||| |||| || || | | | Sbjct 5783304 ACTCGAAGACATCAGCGTGCCACGGCTCAAGGTAGATGGCGAAAGCGCCGGGGCGCTTGT 5783245 Query 111710 CGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATA 111769 | ||| | || | |||||||| || ||| ||| || || || ||||| || || ||| Sbjct 5783244 TG-CCACCCTGGTCGACATAGCGGGCGGTGTTGTTGAACACACGCAGCATGGGGATGATA 5783186 Query 111770 CCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATG 111829 || | || || || || || ||| ||| | |||| | | |||| | Sbjct 5783185 CCGTTGGAGGTGCCGTTGGTGCCGGCAATGTAAGAACCAGTGGCACGGATGCGGTGGACG 5783126 Query 111830 TGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAG 111889 | || ||||| || |||||| ||| || || ||||| | | || || | ||| Sbjct 5783125 TTCAGGCCAATGCCGCCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTGTCGTAG 5783066 Query 111890 ATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTT 111949 || || | ||| ||||||||| || ||| |||||||| |||| || | Sbjct 5783065 ATGCCCTCGATGCTGTCCTCCTTCATGTCGACGAGGAAGCAGGAAGACAGTTGAGCCTGG 5783006 Query 111950 GGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACA--TACCTTGGGACATCT 112007 || || || |||||||| ||||| || | || ||| |||| | | || ||||||| Sbjct 5783005 GGGGTGCCCGCATTGAATAGGGTGGGCGAGGCATGAGTGAAGAATTTGCT--GGACATCA 5782948 Query 112008 TGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCA 112067 || ||| ||||| | ||| || | || || || |||||||| || ||||||| Sbjct 5782947 GGTTGTAGGTCTCGATGACGCGCTCGACATCATCACCCCAGATGCCGACGGCAACCCGCA 5782888 Query 112068 TGAACATGTACTGTGGG 112084 | | ||||| ||| ||| Sbjct 5782887 TAATCATGTGCTGAGGG 5782871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031929346400