Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq4 237 2e-57 seq5 89.7 6e-13 >seq4 Length=5903436 Score = 237 bits (262), Expect = 2e-57 Identities = 1099/1732 (63%), Gaps = 33/1732 (2%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 || ||||||||||| ||||||||||| || |||||||| | | ||||| || Sbjct 5784595 CGCAGGTAGTACATTCCCGTCTTGAGACCGAGCTTCCAGCCCGCGAAGTGCATGCTGGTG 5784536 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | |||| | ||| || | ||| || ||||| ||||| || ||||||||| Sbjct 5784535 ATCTTGCCCATGGTGGGGTCCTTCATATGGATGTTCAGCGACTGGGACTGGTCGATGAAG 5784476 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTG 118016 || || || || ||||| | || ||| | | || ||||| || ||| || Sbjct 5784475 GCACCGCGGTCAGCGGCCATCTGAACGACAGCACGCTGGGAAATCTCCCAGACGGTCTTG 5784416 Query 118017 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTG 118076 || ||| ||| | || ||||||| | ||| || || | ||| || | | | Sbjct 5784415 TACAGGGCCTTGACTTCGGCTGGGATGTTAGGGATGTTCTGAACGGAGCCGTTCTCGGCG 5784356 Query 118077 ACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGA 118136 | || | | |||||| | | ||||||||||| || | || |||| | || Sbjct 5784355 ATGATACGGTTCTTCATGGCATCAGACCAGAGACCCATGTCGACAAGGTCCTTGAGCAGC 5784296 Query 118137 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTG 118196 |||||||| || || || || || ||| | | | ||||| || | ||| Sbjct 5784295 CAGGGGTTGACAACCTGGAATTCGCCAGCAAGCACGCGGCGCTGGTAGATGTTCGAGGTG 5784236 Query 118197 TATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGT 118256 || ||||| ||||| || ||||| || | ||| || | |||||| || ||||||||||| Sbjct 5784235 TAAGGCTCGAAGCATTCGTTGTTGCCAAGGATCTGAGATGTGGAAGCAGTGGGCATGGGG 5784176 Query 118257 GCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAG 118316 || | ||| | |||||| |||| || | | | | || | ||||| |||| |||||| Sbjct 5784175 GCAACGAGCAAGCTGTTGCGGACTCCGTGCTGCTTGATCTGCTCCTTCAGAGAGTCCCAA 5784116 Query 118317 TCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCT 118376 || || | | | || | | ||||||||| |||||||||| || ||||| | Sbjct 5784115 TCCCAGAGGTCAGTGGGCTTGACATCCCACATATCGTACTGGAGGATTCCCTGGGAGACA 5784056 Query 118377 GGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCG 118436 || || ||||| | || || | ||||| ||| || | | | || | Sbjct 5784055 GGGGAGCCCTCGTACGTGGAGTAGGTGCCCTGCTCCTGAGCAAGCTTGCAGGACATGGTC 5783996 Query 118437 AGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAA 118496 ||||| ||||| || || || ||||| || | || | | ||||||| || Sbjct 5783995 AGGGCAGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCACGGGCCTCGGGAGAC 5783936 Query 118497 TCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATT 118556 || || | | ||| | || | || || ||||| || ||||| || || || Sbjct 5783935 TCGAAAGGCATGCGGAGGGCGAGGAAGGCGTCGGCCAGACCCTGAACACCCAGACCGATG 5783876 Query 118557 GGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATA 118616 || ||||| | ||| || || || || || ||||| || | || ||||| Sbjct 5783875 GGACGATGGCGCATGTTGCTGTTGCGGGCCTCCTGAACGGGGTAGTAGTTGACGTCGATG 5783816 Query 118617 ACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA 118676 | | | || || || | || |||| ||||| || || ||||| | | | || | Sbjct 5783815 ATCTTGTTCAGGTTCCTCACAACGACCTGTGTGACCTCGTGCAGCTTCTTGAAGTCGTA- 5783757 Query 118677 CTGCGAGTCTCTTCATTG---ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACA 118733 | | ||| | | | || | || || || | || || || || || ||| Sbjct 5783756 --GACACCCTCGTTGTAGTCCACGAAAGAGGGGAGCGCCAAGGAGGCAAGGTTGCAGACA 5783699 Query 118734 GAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATG 118793 | | |||||| || |||||| || || |||||||||| ||| || || ||| Sbjct 5783698 GCGACCTCATCAGGGGCACAGTACTCGATGATCTCCGTGCACAGGTTGGAGCTGCGGATG 5783639 Query 118794 GTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGC 118853 ||||| | |||||| || || ||| |||| ||||||||||||||| | || Sbjct 5783638 GTGCCGAGGTTCTTCTGGTTGCTCTTCCTGTTGGCGTGGTCCTTGTAAAGCATGAAGGGG 5783579 Query 118854 GTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAG- 118911 | || ||||| || |||| || ||| || || | ||||| | || | ||| | | Sbjct 5783578 TTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCAGAGCTTCTG-----GGCCCTGA 5783524 Query 118912 TGGCGTT----GGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCA 118967 ||| || || |||| ||| |||||||||| ||| || || || ||||| || Sbjct 5783523 TGGTCTTCCGACCCTTGCCCGCCTT-CTCGTACTTTTCGTACAGAGCCTCGAACTCGTCG 5783465 Query 118968 CCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCC 119027 || | || | ||| || || || | ||||| | |||| ||| | || | Sbjct 5783464 CCATAGCAGTCGGCGAGACCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTC 5783405 Query 119028 TCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAG 119087 | ||| || |||||||||||||| || ||||||||||| || ||| ||||| ||| Sbjct 5783404 TTCTCGACACGCTTCATGAAGAGATCGGGGATCCAGAGGGCGAGGAATAGATCGCGAGCA 5783345 Query 119088 CGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGC 119147 || | || || | || || || |||| |||| || || | || ||| |||||| Sbjct 5783344 CGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCCAGGAACTCGAAGACATCAGCGTGC 5783285 Query 119148 CACGGTTCCAGGTACACCGCGATTGACCC------CTTACGACGACCAGCCTGGTTTACA 119201 ||||| || ||||| | |||| | || ||| | | ||| |||||| ||| Sbjct 5783284 CACGGCTCAAGGTAGATGGCGAAAGCGCCGGGGCGCTT--GTTG-CCACCCTGGTCGACA 5783228 Query 119202 TACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTT 119261 || | || ||| ||| || ||||| ||||| || |||||||| | ||| ||| || Sbjct 5783227 TAGCGGGCGGTGTTGTTGAACACACGCAGCATGGGGATGATACCGTTGGAGGTGCCGTTG 5783168 Query 119262 GTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCT 119321 || || ||| ||| | |||| | || ||||| || || ||||| || || Sbjct 5783167 GTGCCGGCAATGTAAGAACCAGTGGCACGGATGCGGTGGACGTTCAGGCCAATGCCGCCA 5783108 Query 119322 GCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCA 119381 ||| ||| || || || || | |||| || ||||||| || ||||| ||| Sbjct 5783107 GCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTGTCGTAGATGCCCTCGATGCTGTCC 5783048 Query 119382 CCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAG 119441 |||| | ||| |||||||||| |||| ||||| | ||| || || || ||||| Sbjct 5783047 TCCTTCATGTCGACGAGGAAGCAGGAAGACAGTTGAGCCTGGGGGGTGCCCGCATTGAAT 5782988 Query 119442 AGAGTTGGTGTCGCGTGGATGAACA--TACCTTGGGACATCTTGTCGTAGGTCTCCAAGA 119499 || || || | || || |||| | | || ||||||| || ||||||||| | || Sbjct 5782987 AGGGTGGGCGAGGCATGAGTGAAGAATTTGCT--GGACATCAGGTTGTAGGTCTCGATGA 5782930 Query 119500 CG-GCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGT 119550 || || | | || || || || |||| | |||||||||| ||||| Sbjct 5782929 CGCGCTCG-ACATCATCACCCCAGATGCCGACGGCAACCCGCATAATCATGT 5782879 >seq5 Length=5645814 Score = 89.7 bits (98), Expect = 6e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 |||||||||||||||||| |||||||| || || || ||| ||| || ||||| || || Sbjct 2728214 GTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAAAAGGTCAGGCCGGGCATCAGGCC 2728273 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||| | |||||| || | ||| | || ||||||||| ||||| || Sbjct 2728274 GCGCTTCTTGAGCCAGAAGATGGACGCAAAGGCACCGCTGAAGAAGATACCCTCAACGGC 2728333 Query 130147 CGCGAACGCAAAGAGACGC 130165 ||||| || | |||||| Sbjct 2728334 AGCGAAAGCGACCAGACGC 2728352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435130426040