Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq4 237 2e-57 seq5 107 2e-18 >seq4 Length=5903436 Score = 237 bits (262), Expect = 2e-57 Identities = 901/1395 (65%), Gaps = 33/1395 (2%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| | ||||| || ||| |||| || || || || | || || Sbjct 5782871 CCCTCAGCACATGATTATGCGGGTTGCCGTCGGCATCTGGGGTGATGATGTCGAGCGCGT 5782930 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTA--TGTTCATTCACGCAACACCAACCCTC 104338 | | ||||| ||| || ||||||| || | | |||| ||| || | || ||||| Sbjct 5782931 CATCGAGACCTACAACCTGATGTCC--AGCAAATTCTTCACTCATGCCTCGCCCACCCTA 5782988 Query 104339 TTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398 |||||||| || || || | ||| |||| |||||||| ||| || |||||| Sbjct 5782989 TTCAATGCGGGCACCCCCCAGGCTCAACTGTCTTCCTGCTTCCTCGTCGACATGAAGGAG 5783048 Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458 ||| ||| | || ||||| | || || | | ||||| || || ||| |||| Sbjct 5783049 GACAGCATCGAGGGCATCTACGACACCCTCAAGACCTGTGCCATGATTTCCAAGATGGCT 5783108 Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 104518 || || ||||| || || |||| | | |||| | ||| ||| || || Sbjct 5783109 GGCGGCATTGGCCTGAACGTCCACCGCATCCGTGCCACTGGTTCTTACATTGCCGGCACC 5783168 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 || || || | ||||| || || ||||| || || || ||| ||| || |||||| Sbjct 5783169 AACGGCACCTCCAACGGTATCATCCCCATGCTGCGTGTGTTCAACAACACCGCCCGCTAT 5783228 Query 104579 GTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634 || | || | ||| | | | | || || |||| |||| |||||||| ||||| Sbjct 5783229 GTCGACCAGGGTGG-CAACAAGCGCCCCGGCGCTTTCGCCATCTACCTTGAGCCGTGGCA 5783287 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694 ||| ||| || | |||||||| || |||| ||||| || | ||||||| || || Sbjct 5783288 CGCTGATGTCTTCGAGTTCCTGGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCG-TG 5783346 Query 104695 C-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 | |||||||| ||| ||| |||||||| || ||||||||||||||| | || ||| ||| Sbjct 5783347 CTCGCGATCTATTCCTCGCCCTCTGGATCCCCGATCTCTTCATGAAGCGTGTCGAGAAGA 5783406 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCGTGGGT 104812 ||| | ||| |||| | || || || || ||||||||| |||| ||| | || Sbjct 5783407 ACGGCGACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGTCTCGCCGACTGCTAT-GGC 5783465 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAG------AAGGTCGGGCGACTGCG 104866 || ||||| || || || ||| |||||||||| | | | |||||| ||| Sbjct 5783466 GACGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGCGGGCAAGGGTCGGAAGACCATC 5783525 Query 104867 ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926 | || |||| || | ||| | || || ||| || | || ||||||||||| | Sbjct 5783526 A-GGGCCCAGAAGC-----TCTGGTATGCCATCCTCGAGGCCCAGACCGAGACTGGCAAC 5783579 Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986 || | |||||||||||| ||| | ||| ||||| || || ||||| | || Sbjct 5783580 CCCTTCATGCTTTACAAGGACCACGCCAACAGGAAGAGCAACCAGAAGAACCTCGGCACC 5783639 Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 105046 ||| || ||||| || || || || ||| | || | | | |||||| ||| Sbjct 5783640 ATCCGCAGCTCCAACCTGTGCACGGAGATCATCGAGTACTGTGCCCCTGATGAGGTCGCT 5783699 Query 105047 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATT 105105 || || ||||| || || | || |||||| | ||||| | || || | | | Sbjct 5783700 GTCTGCAACCTTGCCTCCTTGGCGCTCCCCTCTTTCGTGGACTACAACGAGGGTGTC-TA 5783758 Query 105106 TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTAT 105165 || | | || || ||||| || || | || | ||||| |||| | || Sbjct 5783759 CGACTTCAAGAAGCTGCACGAGGTCACACAGGTCGTTGTGAGGAACCTGAACAAGATCAT 5783818 Query 105166 TGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 105225 || || | ||||||||| || || || || || ||| | || ||||| || Sbjct 5783819 CGACGTCAACTACTACCCCGTTCAGGAGGCCCGCAACAGCAACATGCGCCATCGTCCCAT 5783878 Query 105226 TGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTT-GATT 105284 ||||| |||||||||||||| || || | ||| || || || || ||| || | Sbjct 5783879 CGGTCTGGGTGTTCAGGGTCTGGCCGACGCCTTC-CTCGCCCTCCGCATGCCTTTCGAGT 5783937 Query 105285 CCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTG 105344 | ||| || || |||| || || ||||||||||| || ||||| || | || Sbjct 5783938 CTCCCGAGGCCCGTGAGCTCAACAAGCAGATCTTTGAGACCATCTACCACGCTGC-CCTG 5783996 Query 105345 AGGCGAGTTCAG--AGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 105402 | | || | | || | || ||| | || | || || | ||||| || || Sbjct 5783997 A-CCATGTCCTGCAAGCTTGCTCAGGAGCAGGGCACCTACTCCACGTACGAGGGCTCCCC 5784055 Query 105403 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGA 105462 | || || || | || || | ||||||||||| | || ||| | || || Sbjct 5784056 TGTCTCCCAGGGAATCCTCCAGTACGATATGTGGGATGTCAAGCCCACTGACCTCTGGGA 5784115 Query 105463 CTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGC 105522 ||||| |||| ||||| | |||||| || | || | || ||||| | ||| | || Sbjct 5784116 TTGGGACTCTCTGAAGGAGCAGATCAAGCAGCACGGAGTCCGCAACAGCTTGCTCGTTGC 5784175 Query 105523 TCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 105582 || ||||| || || ||||| | || ||| | || || || |||||||| || || || Sbjct 5784176 CCCCATGCCCACTGCTTCCACATCTCAGATCCTTGGCAACAACGAATGCTTCGAGCCTTA 5784235 Query 105583 CACGACGAACATCTA 105597 ||| |||||||||| Sbjct 5784236 CACCTCGAACATCTA 5784250 >seq5 Length=5645814 Score = 107 bits (118), Expect = 2e-18 Identities = 96/118 (81%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGG 94886 |||||||||||||||||| ||| |||| |||| | || | |||||||||||||| || Sbjct 2728330 GTTGAGGGTATCTTCTTCAGCGGTGCCTT-TGCGTCCATCTTCTGGCTCAAGAAGCGCGG 2728272 Query 94887 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 || ||||| || || ||| ||||||||||| ||||| ||||||||||| |||||| Sbjct 2728271 CCTGATGCCCGGCCTGACCTTTTCCAACGAGCTCATCTCGCGTGACGAGGGTCTCCAC 2728214 Score = 89.7 bits (98), Expect = 6e-13 Identities = 195/289 (67%), Gaps = 6/289 (2%) Strand=Plus/Minus Query 169169 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 169228 || || ||||| || |||||||| ||| ||| | ||||||||| | | |||| ||| Sbjct 3720376 AGGCCTTTGATATGACTACCGTCGTGATCTTGATCGGCCATGATCATCAAATGACCGTAC 3720317 Query 169229 CGAAG---CTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTG 169285 || || || || | | || ||| || || | ||||| | || || |||| Sbjct 3720316 CGCAGGCCCTTGGTATCGG--TG-TAGGTCTGCTTGTGCTTGAGACCAAGGAACTGCTTG 3720260 Query 169286 AGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTTA 169345 | | | || || ||||| |||| ||| || ||||| ||||| || || Sbjct 3720259 ATGTTCTGGATTTCCTGGTTCTTGGTGATCTGGTCGAGGGAGGCGTCGCGCACGTTGAGC 3720200 Query 169346 CACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGAGACCCGCG 169405 ||| ||||||||||||||||||||| | | ||| | ||| || | |||| ||| Sbjct 3720199 ATCTTTCCACGAAGAGGGAAGACACCGATGCGGTCAGGGTCAAGGATCGCACGACCAGCG 3720140 Query 169406 ACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACATT 169454 || || | | |||| ||||||||||| ||||||| ||||| || |||| Sbjct 3720139 ACGGCCAAACTCTTGGCCGAGTCACCTTCGGTGAGAATGAGGGTGCATT 3720091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260734383160