Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq6 158 4e-33 seq4 105 2e-17 >seq6 Length=5170228 Score = 158 bits (174), Expect = 4e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || ||||| ||||| ||||| || || || || ||||| || | || || |||||| Sbjct 5109972 AGGACGAGATGCAGAGTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTACGTCCATCT 5110031 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || |||||||| ||||| || || ||||| ||||||||||| || || |||||| Sbjct 5110032 TCCAGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTATCC 5110091 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || | || || ||||| |||| || || | ||| ||||| || |||| ||| Sbjct 5110092 TGGATCTTCGACTTCACGTTATCGATCGTGTCGGACGATTCGACTTCCAGGGTAATAGTC 5110151 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || || || ||||| |||||||| Sbjct 5110152 TTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 5110183 Score = 136 bits (150), Expect = 1e-26 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || ||||| || |||||||| || || || || || || Sbjct 5110181 CATACCACCACGCAGACGAAGGACGAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTC 5110240 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || |||||||| | || || || |||||||| || || ||||| || || Sbjct 5110241 AGACAGGGTGCGGCCATCTTCCAACTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCGGG 5110300 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 ||| || || || || ||||| || || ||| || || || || || | ||||| | | Sbjct 5110301 AGGGATGCCCTCCTTGTCCTGGATCTT-GCTCTTCACGTTGTCGATTGTGTCAGAAGACT 5110359 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||||| || || | ||||||||||| || || || || ||||||||||| Sbjct 5110360 CGACTTCCAGAGTGATGGTCTTTCCGGTGAGGGTCTTGACGAAAATCTGCAT 5110411 Score = 107 bits (118), Expect = 6e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | || || || || || || ||||| || || ||||| || || Sbjct 5110409 CATGCCACCACGCAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTC 5110468 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| |||||||| || || || || || ||||| ||||| || || Sbjct 5110469 GGAGAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCGGG 5110528 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || || ||||| || || | || || || || || | ||| || | || Sbjct 5110529 AGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGGAAGACTC 5110588 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || || || || | ||||||||||| || || || || Sbjct 5110589 GACCTCGAGAGTGATGGTCTTTCCGGTCAGGGTCTTGAC 5110627 Score = 95.1 bits (104), Expect = 4e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 140541 GTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCA 140600 || ||||| || || ||||| || || || | || || ||||| |||||||| || || Sbjct 5052167 GTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGTTGCTTGCCG 5052108 Query 140601 GCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTT 140660 || || || ||||| ||||| || ||||| || || || || ||||| || || | || Sbjct 5052107 GCGAAAATCAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTG 5052048 Query 140661 ACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTT 140720 || || || || | ||| || | || || || || || | ||||||||||| || || Sbjct 5052047 ACGTTGTCGATGGTATCGGAAGACTCGACCTCGAGAGTGATGGTCTTTCCGGTCAGGGTC 5051988 Query 140721 TTTAC 140725 || || Sbjct 5051987 TTGAC 5051983 >seq4 Length=5903436 Score = 105 bits (116), Expect = 2e-17 Identities = 315/481 (65%), Gaps = 4/481 (1%) Strand=Plus/Minus Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT- 349677 ||||| || ||||| || || || |||||||| || || || || || || ||| Sbjct 5425446 ACTGTCCCTGCCTACTTCAACGACTCCCAGCGTCAGGCCACCAAGGACGCCGGTCTCATC 5425387 Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 ||||| | || || || | || || || || ||||| || || || ||||| || || Sbjct 5425386 TGCGGCCTCAAC-GTCCTCCGTATCATCAACGAGCCCACCGCCGCTGCCATTGCCTACGG 5425328 Query 349738 GCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTAC 349797 || || || | | || || || | || || || ||| | || |||||||| Sbjct 5425327 TCTCGACAAGAAGGTCGAGGGCGAGCGCAACGTCCTCATCTTCGATCTTGGCGGTGGTAC 5425268 Query 349798 TTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGG 349857 ||| ||||| || || || || | || ||||| ||||| || || || | ||||| || Sbjct 5425267 TTTCGATGTCTCTCTGCTCACCATCGAGGAGGGTATTTTCGAGGTCAAGTCTACTGCCGG 5425208 Query 349858 TGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGA 349917 |||||| || || || || || || || || || || || || || || || |||| Sbjct 5425207 TGATACTCACCTGGGAGGCGAGGACTTCGACAACCGCCTTGTCAACCACTTCGTGCAAGA 5425148 Query 349918 ATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAA 349976 || ||||| ||||| || | || | | || || | || |||| || || Sbjct 5425147 GTTCAAGCG-CAAGCACAAGAAGGACCTGAGCACCAACGCTCGCGCCCTGCGCCGTCTCC 5425089 Query 349977 GAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAA 350036 | || || || || ||||| |||||| | | || ||| | | || ||||| || || | Sbjct 5425088 GCACCGCTTGCGAGCGTGCCAAGCGTACTCTGTCCTCTTCCGCTCAGACCTCGATCGAGA 5425029 Query 350037 TTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAG 350096 | || || || || || | || |||| | ||||| || |||||||| || || | Sbjct 5425028 TCGACTCCCTCTTCGAGGGTATCGACTTCTACACTTCTATCACCCGTGCTCGCTTCGAGG 5424969 Query 350097 A 350097 | Sbjct 5424968 A 5424968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515254225272227